Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | MVDLVQGEEPKRPGGNLQQQQRFRERLTQEILSQTQLRAWVMAGVFNEHLMMRLKLVEKLAGMLDPGHLALTRISRQLTLLQQTESPRGQAIPGITQQLAALSDGFARRSEHKEKALTRRGLTVQAGEHSEQIFTRWRAGAYDGWSLPGRCFVALEELRWGPFGDACRLGNMEVVAMLKDNLRAMATDYLAHSIHAAPTTRHYYHQWLHSPAVAGAGEHNDMLSWIGDWCDPDKHPVCWSVTQRWQTVALGMPRLCSAQRLVDAMIEEIF |
1 | 1eq1A | 0.09 | 0.04 | 0.44 | 0.65 | DisCoVER | | MEKHAKFQTF--------------------------------------------------------------SE--QFNSL--------------------------------------------------VN--SKDFNKALKGSDSVLQQLSAFSSSL--QG-AISDANGKAKEALEQARQ-NV--EK-----------T-A--EE-LRHPDVEAFKDKLQAAVQTTLAPKIKQAYDDFV----------HAEEVQKKLHEA---AT- |
2 | 3ebgA | 0.04 | 0.03 | 0.70 | 0.83 | DEthreader | | -----------------YALTYKSIIVSQCSCLFMENEHGKEGLTVHRENLFSEEMTKT-V-----T--TRLSHVDLLRSVQFETTVYKGSEVMRMYTPFRGFSDAFVRYSCFIDAIKYEVYYKMFKSLEAKADD--LTYFNDES---V---DQMNMR-TLRNTLLSLLSAQPNILNEIIEHSKSPYPSN-----------DKTYKLSKD--------DELLLQEWLKTVSRSD-----------SKNPNDRA----------------- |
3 | 6m3pA | 0.07 | 0.06 | 0.83 | 0.49 | CEthreader | | ----------------------------------------------AAEAEAWMSEQELYMMSAVSMLKKHQILEQAVEDYAETVHQLSKTQSKVDKLYAGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVERFREFARDTGNIGQERVDTVNNMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEIFGRIQDKHKKLPEENTVLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYA |
4 | 6m3pA | 0.07 | 0.05 | 0.74 | 0.80 | EigenThreader | | SE---DEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALDERHRLFQLNREVDDLEQWIAEREVVAGSGQERVDTVNNMADELINSGHSDAAIAEWKDGLNEAWADLLELIDTRTQILAASYEFYHDAKEIFGRIQDKHKKLPEFEHDIQALGTQVRQLDAARLQAAYAGDDIQKRENEVLEAWKSLLDACEGRRVRLVDT------------------------------------------------------------------- |
5 | 6h8qA1 | 0.09 | 0.07 | 0.73 | 0.35 | HHpred | | --EIQLLFKLHEFYLLIKKMGPLYQNFAEFMTKLLEVANLLYVG---NLVLDLLTWLSSFSVCKIRCFRYISTLQDYLTQQAVNL--EKNYLAKLSKQLSLEEKKNNKTLEKLESTIAETQGSKVIDSIIDNIVKLCFVHRYKDVSDLIRSESMLH------LSIWIKNYPEY----FLK------------------VTFLKYFGWLLSDN--SVSVRLQVTKILPHLIIQN------------------------------------- |
6 | 3edvA | 0.10 | 0.07 | 0.74 | 0.40 | MRFsearch | | -------------AATIAEWKDGLNEAWADLLELIDTRTQILAASYYHDAKEIFGRIQDKHKKLTTFEHDIQALGTQVRQLQEDAARLQAAENEVLEAWKSLLDACESRRVRLVDTGDKFRFVRDLMLWMEDVIRQIEAQKPRDVSSVELLMNNHQGIKA----------EIDARNDSFTTCIELGKSLLARKH-------------------YASEEIKEKLLQLT----------------------------EKRKEMIDKWEDRWE |
7 | 5j1fA | 0.12 | 0.08 | 0.65 | 0.85 | FFAS-3D | | ---------------SHMAYAQFFSDV-REAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAKAVNQEAQEAVTRLEAQHQALVTLWHQLHVDMKSLLAWQSLRRDVQLI-RSWSLATFRTLKPEEQ-RQALHSLE-LHYQAFLRDSQPEDRLMAEREYGSHHYQQLLQSLE--------------------------------------------------------------------------- |
8 | 5cwcA | 0.14 | 0.10 | 0.71 | 0.63 | SPARKS-K | | -----------------SEKEELRERLVKICVENAKRKDDT--EEAREAAREAFELVREAAERAIDSSEVLELAIRLIKECVENAQREG---YDISEACRAAAEAFKRVAEAAKRAITSSEVLELAIRLIKECVENAQREGYD---ISEACRAAAEAFKRVEAAKRAGITSSETLKRAIEEIRKRVEEAQREG-----------------------NDISEACRQAAEEFRKKAEELKRR------------------------------ |
9 | 4gmxC | 0.10 | 0.09 | 0.89 | 0.72 | CNFpred | | CGIIISEER------SVAERNRLLSDLMQLPNMAWDTIVEQ-DSETVKIIANIIKTNVAVCTSMGDFYPQLGHIYYNMLQLYRAVSSMISAQ-PKVRGLRTIKKEILKLVETYISKALDDVVKVLVEPLLNAVLEDYMNN---PDARDAEVLNCMTTVV-----EKVGHMIPQGVILILQSVFECTLDMINKDFTEYPEHRVEFYKLLKVINEAFLELPPAAFKLFVDA-------ICWAFKHNNRDV------EVNGLQIALDLVKNIE |
10 | 6m3pA | 0.05 | 0.04 | 0.71 | 0.83 | DEthreader | | ---------DEQSAVSMLKKHQILEQAVEAKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEEVVAFADTGIGQERVDTVNNMADELIGHDATIAEWKDGLNEAWADLLELIDTRTQ-ILAASYELHKFYHDAKEIFGRIDKFHDIQALGTQVRQLQE-D-AARLQ--AAYAGKADDIQKRENEVLEAWK-SL-------L----D---------ACEGR-RV--RLVDT--------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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