Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MKELGVIFYNCSCLVLDLQRIFALYSSLKFKSRVPQTWSKRLYGVYDNEKKLQLQLNETKSQAFVSNSPKLFCPKNRSFDIDAIYSVIDDAKQYVYIAVMDYLPISSTSTKRTYWPDLDGKIREALVLRSVKVRLLISFWKETDPLTFNFISSLKAICTEIANCSLKVKFFDLERE |
1 | 2ze9A | 0.13 | 0.12 | 0.92 | 1.29 | HHpred | | VSDVDMALSG--PAARSAGKYLDTLWDWTCRNASDKVWLATSASCMPSEAGPAEPTGDVPVIA-VGGDPSGYHPDTVNPEENALRSLIASARSHVEISQPLPRYD----------IRTYDTLAGKLA-AGVKVRIVVSDPANRGAISDTLASRALCGNLQFRPYALHHKLVSVDDS |
2 | 2ze9A | 0.13 | 0.12 | 0.92 | 1.80 | HHsearch | | VSDVDMALSG--PAARSAGKYLDTLWDWTCRNASDKVWLATSAPSMQDEAGPAEPTGDVPVIA-VGGDPSGYHPDTVNPEENALRSLIASARSHVEISQPLPRYD----------IRTYDTLAGKLA-AGVKVRIVVSDPANRGAISDTLASRALCGNLQFRPYALHHKLVSVDDS |
3 | 4ojvA | 0.09 | 0.08 | 0.91 | 1.00 | DEthreader | | G-TQCFILKELITDYKTI-WGTIDVLQK-HVFNWPDLTARKLKLKCLNEVQKCTIF---PWDVIPFKVHIG--APVY-STF--YI-FR-RKSKDCIIVCGDVE-QDRRESEESLLEEFWSYVAENIP-LVHLKGILVECSCLLSIYLINELSNLNTLYNSSKLSGLNVIVTHVKST |
4 | 4jo0A2 | 0.09 | 0.09 | 0.90 | 1.00 | DEthreader | | VGHACVFARHTTFLVHLL--ITHNHQDHMLFEILRLGF-TDV--VEV-DDLETLSCGSAEVVALPFL---GEHGDLIKSTNSTMYTKVAIGPVDTVFIG-MESIGAAAQSRRNSNFPQAREIVDAL--EPDEVYVYAMLVDYDSHPAIVDSDLLVRHVQDK-GGTAERLHLR---- |
5 | 6ohmA | 0.14 | 0.13 | 0.95 | 1.30 | HHpred | | WRDVGVVVHG--LPARDLARHFIQRWNFTKTTKAKYK-TPTYPY----LLPKSPGGQCTTVQV-LRSVDRWSAGTLENSILNAYLHTIRESQHFLYIENQFFISCSDGRTVLKVGDEIVDRILKAHK-QGYRVYVLLPLLPGFDNSEYSILHRLKAAMGAYLGIYIHSKVLIADDR |
6 | 6ohmA | 0.15 | 0.14 | 0.93 | 0.77 | MRFsearch | | --DVGVVVHG--LPARDLARHFIQRWNFTKTTKAKYKTP-----TYPYLLPKSPGGQCTTVQVLRSV-DRWSAGTLENSILNAYLHTIRESQHFLYIENQFFISCSDGRTVNKVGDEIVDRILKAHKQWCYRVYVLLPLLPGFCRGEYSILHRLKAAMGTSELIYIHSKVLIAD-- |
7 | 6ohrA | 0.11 | 0.11 | 0.96 | 0.87 | SPARKS-K | | WHDIASAVHG--KAARDVARHFIQRWNFTKIMKSKYRSLS-----YPFLLPKSQRYQSVHANVQLLRSAADWIKYHEESIHAAYVHVIENSRHYIYIENQFFISADDKVVFNKIGDAIAQRILKAHREQKYRVYVVIPLLPGFHFNYRTMLGQLKAELGNQWIIYVHSKLLIADDN |
8 | 6kz8A | 0.12 | 0.12 | 0.99 | 0.92 | MAPalign | | SQRQGCKVSLYEDIFDAVTIGELLKKKASEGVRVTMFTHHQKIVVVDSEMPVSFVGHDIHSRLEGPNVQLFRSNIIDRSIQDAYIHAIRRAKDFIYVENQYFLGSSITPEDINALHLIPKELSLKIVSEKFRVYVVVPMVQAILDWQRRTMEMMYKDVIQAPRNYLTFFCLGMIY- |
9 | 6wn6A | 0.06 | 0.06 | 0.97 | 0.67 | CEthreader | | KIGTQNQAFFPENILEKFRYIKEMGFDGFEIDGKLLVNNIEEVKAAIKETGLPVTT----ACGGYDGWIGDFIEERRLNGLKQIERILEALAKGIVVPAAWGMFTFRLPPMTSMVSDSLRVLEQVAARTGTVVYLEPLNRYQDHMINT--LADARRYIVENDLKHVQIIGDFYHMN |
10 | 6ohrA | 0.11 | 0.11 | 0.99 | 0.84 | MUSTER | | WHDIASAVH--GKAARDVARHFIQRWNFTKIMKSKYRSLSYPFLLPKSQRYQVPGSVHANVQLLRSAADWSAGKYHEESIHAAYVHVIENSRHYIYIENQFFISCADDKVFNKIGDAIAQRILKAHREQKYRVYVVIPLLPGFEYRTMCILGQLKAELGNQWINYISFCGLRTHAE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|