Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | CCGSVCSEQSCGLETCCRPTCCQTTCCRTTCCRPSCCISSCCRPS |
1 | 4mt2A | 0.41 | 0.36 | 0.87 | 2.06 | SPARKS-K | | SCGSCSCAGSCCKQCKCTS--CKKSCCS--CCPVGCCKCSCCA-- |
2 | 5kwgC | 0.28 | 0.27 | 0.96 | 1.37 | CNFpred | | PCSPMCKGSRCWGESDCQSLTR--TVCAGGCARCDCCHEQCAAGC |
3 | 2z7fI | 0.06 | 0.04 | 0.76 | 0.62 | DisCoVER | | -RRKPGKCPVTYGQCPPNFCEMDLKCCMG---------MCGKSC- |
4 | 2l2gA | 0.09 | 0.09 | 1.00 | 0.61 | CEthreader | | QVTNPATGHLFDLNSLKNDGICGGTCPSGVGVCFGLTKINAGSWN |
5 | 4fxsA | 0.00 | 0.00 | 1.00 | 0.50 | EigenThreader | | NACKRLRVGGAAGVDHGHLEVATVSAVGIGIPVIADGGAGASCVV |
6 | 2hm5A | 0.31 | 0.11 | 0.36 | 0.13 | HHpred | | ----------------------------SGDCYPEC-PPGCCGQV |
7 | 1yy9A1 | 0.17 | 0.16 | 0.93 | 0.70 | MRFsearch | | --SCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCS-GRCRGKS |
8 | 1cvuA | 0.23 | 0.18 | 0.78 | 0.13 | FFAS-3D | | CCSNPCQNRGECMSTGFDQDCTRTGFYGENCTTPE---------- |
9 | 5ml1A | 0.29 | 0.29 | 1.00 | 1.92 | SPARKS-K | | GCTDVCKQCNCTDDCKCQSCKCTDTCCKEDCRCQSCSTACKCAAG |
10 | 2a91A | 0.27 | 0.27 | 1.00 | 1.14 | CNFpred | | PCSPMCKGSRCWGEDCQSLTVCAGGCARCKGLPTDCCHEQCAAGC |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|