>PF13875 (183 residues) EQALAGIDDAHRGDPNIVTVDGSEIPYELHYANKMTKYLEKHNPSASEALKLAVRAQHLR RWEIPRSSYPMTKPGYFSWRTALKNRQADIADEICRNCGYDEDAAGRVAALVRKENMKRD EECQVLEDVACLVFLDDQFEKFEKEHDEEKIVGILKKTWAKMSERGHELALQIDMSDRAK GLV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
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Seq | EQALAGIDDAHRGDPNIVTVDGSEIPYELHYANKMTKYLEKHNPSASEALKLAVRAQHLRRWEIPRSSYPMTKPGYFSWRTALKNRQADIADEICRNCGYDEDAAGRVAALVRKENMKRDEECQVLEDVACLVFLDDQFEKFEKEHDEEKIVGILKKTWAKMSERGHELALQIDMSDRAKGLV | |||||||||||||||||||
1 | 6cptA | 0.09 | 0.08 | 0.91 | 1.17 | DEthreader | LAFIFIVRDTY-KNGNPF--------HNFRHAVDVLQACFHFLISPTLGLLVAALGHDVGHP--GTTNDFM-K----ADRSVLESYHASLFINVLRICWLLTTIRSLIISSILATDHYRLISALLIKCADISNVTSQWAMVSLQPDIHKGQIFFINFAENLFVSQLQYTCDIIENKLFWLER- | |||||||||||||
2 | 5yijA1 | 0.07 | 0.07 | 0.89 | 1.17 | DEthreader | TAAAQYAYDNLGKPYPANF-GGRMVRQGLSHTLRTMAYAELIVTPELKKIMIAQAFFVAG--RDDE---AS----DAKNYQKYHEQSRDAFLKYVKDNELIQEDVNFYARVIEDKHDWSTPAHVLINQGHMVDLV-RVK--Q-------PPESFLQRYFSSMRWIATEVFGIQRVAGFDGKHL | |||||||||||||
3 | 2qgsA | 0.08 | 0.07 | 0.85 | 1.52 | HHpred | ----RKIKKAYEY---KSFHQHDTTGHDIAHVERVYNNACYIAKRDTLVIELSSLLHDTVDSKLT---------D--------EILAYDQLKQFLSTLDLSSEISQQVLYIIKHSHVKLSIDGEIVRDADRLDAIGAIGIARTFWTEIKHFYEKLFKLKD-LTPTAKKLAEERHI-QYLKQF- | |||||||||||||
4 | 5dqvA | 0.11 | 0.09 | 0.78 | 0.74 | DisCoVER | -KQADQIRTWVQSVL------------DWLHISRVADLAVYIG-ADLFIVETAALVHDLIDLI-------------------R--LSVSEVYNQLVTFGIGKEDADRVIHIITKM-SPLSIEGKVVQDADRLDAIGAVGIARADQSAYAHFFHKLLRLI-MNTDTARELAEERHEF--MLID- | |||||||||||||
5 | 2qgsA | 0.07 | 0.05 | 0.79 | 0.42 | MRFsearch | --KIKKAYEYKSF-----------TGHDIAHVERVYNNACYIAKTDTLVIELSSLLHDTVDSK-----------------LTDEILAYDQLKQFLSTLDLSSEISQQVLYIIKHSHVKLSIDGEIVRDADRLDAIGAIGIARTFQFSIKHFYEKLFKLKDLHTPTAKKLAEERH--------- | |||||||||||||
6 | 5dqvA | 0.13 | 0.11 | 0.83 | 1.09 | SPARKS-K | DQIRTWVQSVLTD---------------WLHISRVADLAVYIGEKELFIVETAALVHDLIDVKLPDTIRLS----------------VSEVYNQLVTFGIGKEDADRVIHIITKMS-PLSIEGKVVQDADRLDAGAVGIARAFMFAGAKHFFHKLLRLIDMMTDTARELAEERFMLQYIRQLE | |||||||||||||
7 | 6b7mA | 0.10 | 0.09 | 0.95 | 0.87 | MAPalign | LEVAEYVYKRLSQPYRYITIDGKQLHRHLAHTMRTLMYSQLMLSEDLKKINIAQLFFVAGR--E-------SEASYGDAYHRYHLYGAKQFEEYARKHLFSEEEIRLYSRCIEDRVFDGTPEGYIIHLSHMIDLMFLGVPTLIHLFGKQDGLDIMHYARGLFAATGE-AVPYIDSALIVGDIN | |||||||||||||
8 | 6dk9A | 0.11 | 0.09 | 0.86 | 0.67 | CEthreader | ETARLVREYAAKELT----------APVLNHSLRVFQYSVAIIDLDQEVLYVTCLLHDIATTDKNMRATKM----------SFEYYGGILSRELVFNATGNQDYADAVTEAIIRHQDLITTLGLILQIATTLDNVGSNTDLI-----HIDTVSAINEQFPRLHWLSCFATVVDTENSRKPWGH | |||||||||||||
9 | 2pq7A | 0.12 | 0.10 | 0.84 | 0.65 | MUSTER | REILNIVREAFK--------DYDDPAHDISHTFRVENASEIASKCDLQKAIIAALLHDIKRPHEALTGVD------------HAESGAEYASGLLPT-GFDISFVAEVSKAIRSHRTPTSLTGKILQDADRLDAIAVAIARVFSYPET------FWTETARKAEDRYSFVVEF---QRFLAEW | |||||||||||||
10 | 2qgsA | 0.07 | 0.06 | 0.86 | 1.80 | HHsearch | SRKIKKAYEY-KS-----FHQHDTTGHDIAHVERVYNNACYIAKRDTLVIELSSLLHDTVDSKLT-----------------DEILAYDQLKQFLSTLDLSSEISQQVLYIIKHSHVKLSIDGEIVRDADRLDAIGAIGIARTFFTAIKHFYEKLFKLKD-LTPTAKKLAEERFI-QYLKQFS | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |