Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | VNVDFEWFNFDAEIDFHGTKALLRQLFDVDAVKFNISGLADLIISQPTIGSTVKVDDKANDAYALMTVLNMHEHRDKPAFADLTKYIIEKAQTNEALAPIPELLTSGAQVGLVLTERLINMPTEIAPPMYRMLIDEVEAAVEDKEPYEFTHYLVLSKTYREVEPEAELRTERKGKKQKGEDGSMWYFHPEDEV |
1 | 7c4hA | 0.36 | 0.30 | 0.84 | 2.04 | SPARKS-K | | VNIDFDFFGGNPEVDFHALKNLLRQLFGQESTRIQLSSLADLILGSP--TTTIKTDGKESDPYCFLSFVDFKANHLS----DYVKYLQKVDM--RLSTFFKTMIDSGKNCALVLSERLINMPPEVVPPLYKITLEDVATALGDDKH--YDFYIIVTRKYEV--------------------NEVDYFHEEDRF |
2 | 7c4hA | 0.28 | 0.25 | 0.89 | 1.13 | MAPalign | | --IDFDFFGGNPEVDFHALKNLLRQLFGPQSTRIQLSSLADLILGS--PTTTIKTDGKESDPYCFLSFVDFKANHLSDYVKY----LQ--KVDMRLSTFFKTMIDSNKNCALVLSERLINMPPEVVPPLYKITLEDVATAL--GDDKHYDFYIIVFYAKIHFE---------SEAKKGVISSYMILDHEGLSI |
3 | 7c4hA | 0.34 | 0.29 | 0.84 | 1.20 | CEthreader | | VNIDFDFFGGNPEVDFHALKNLLRQLFGPQSTRIQLSSLADLILGSP--TTTIKTDGKESDPYCFLSFVDFKANHLS----DYVKYLQKVDM--RLSTFFKTMIDGNKNCALVLSERLINMPPEVVPPLYKITLEDVATALGDDKH--YDFYIIVTRKYEVN--------------------EVDYFHEEDRF |
4 | 7c4hA | 0.35 | 0.30 | 0.84 | 7.05 | HHsearch | | VNIDFDFFGGNPEVDFHALKNLLRQLFGPESTRIQLSSLADLILGSP--TTTIKTDGKESDPYCFLSFVDFKANH--L--SDYVKYLQ-KV-DMRLSTFFKTMIDGNKNCALVLSERLINMPPEVVPPLYKITLEDVATALGDDKH--YDFYIIVTRKYEVN--------------------EVDYFHEEDRF |
5 | 7c4hA | 0.34 | 0.29 | 0.84 | 2.00 | FFAS-3D | | VNIDFDFFGGNPEVDFHALKNLLRQLFGQESTRIQLSSLADLILGS--PTTTIKTDGKESDPYCFLSFVDFKANHLSDYVKYLQKVDMRLS------TFFKTMIDSGKNCALVLSERLINMPPEVVPPLYKITLEDVATALGDDKH--YDFYIIVTRKYE--------------------VNEVDYFHEEDRF |
6 | 4fd4A | 0.05 | 0.04 | 0.88 | 1.03 | MAPalign | | ---SIVLRVARLD-ELEQVREILHRIEEGITISYDERFSL-SFVEQG-TVVVAEDSA-AKKFIGVSIAGPIQPTTETKKWGDILKLLALLE-------RTADVCGRYLKAYHVHLAVDPTYRGHLGQRLLQFQMDLSKKLG-------FKAISGDMECISQLALGDYRDEKGEKLFEPVHQVIKTCVKLL--- |
7 | 3qb8A | 0.05 | 0.04 | 0.73 | 1.00 | DEthreader | | ---MYTLIKLT-SEYTSRAISFTSRNFVLTTDFTSFQNIMKQCVDYG-HSFAFVD-AD-DNIKAQILNIPYDAYENMHYGNI-TDPMFDLFG-----N-LDSYT-PDDCLYVFAIGSE-VTGKGLATKLLKKTIEESSSHG-----FKY-IYGDCTNII----------------------NCTE-------- |
8 | 3qb8A | 0.07 | 0.05 | 0.75 | 1.00 | DEthreader | | ---MYTLIKLTSE-YTSRAISFTSRFVLTDFTTSFQ-NIMKQCVDYG-HSFAFVD-AD-DNIKAQILNIPYDAYENMHYGNI-TDPMFDLFG-----N-LDSYT-PDDCLYVFAIGSE-VTGKGLATKLLKKTIEESSSHG-----FKY-IYGDCTNII------------------K-FDSINCT------- |
9 | 1nmtA | 0.08 | 0.06 | 0.79 | 0.38 | HHpred | | ---LKGLRPMT-GKDVSTVLSLLYKYQERFVQLFTEEEFKHWMLGHSNVKSYVVED-ENGIITDYFSYYLLPFTDNDKRLNELITDALITSKKFG-V----DVFN---CLTCQDNTY---------------FLKDCKFGSGDG---FLNYYLFNYRTFPMDGGIDK----KTKEVVEDQTSGIGVV------ |
10 | 6mfcB | 0.10 | 0.08 | 0.78 | 0.58 | DisCoVER | | ----HRIRHARP-SDLDALCALEARCAPLRA----SRELLRRVTTEPRGCWVLLHE---GAIVGATYAQRIA-----------GPAALAGA---RHSELAGLHDPSGAALQLLGLNVDPAVNHDFGSLL---LEFVLAAARL---RPGIENVVGVSIGGIIS----------GYRPEDVDNDGAGVIVIHAL- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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