>PF13836 (185 residues) IFVGEISGSKPAISNILNRVNPSSYSRGIKNGALSRGITAAFKSTSQHYTNPTSNPVAAS PVNFHPESRSSDSSVIVQPLSKPGYITNSSRVVTNNSSELLFDLTQDTGLPHYQGGTTLS IAGINESSFLSKRPSTSEVNSVNPKKSKPSEGVSGTNSSAVLSSVKSLSVTSSQAMPSKG TNTSS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | IFVGEISGSKPAISNILNRVNPSSYSRGIKNGALSRGITAAFKSTSQHYTNPTSNPVAASPVNFHPESRSSDSSVIVQPLSKPGYITNSSRVVTNNSSELLFDLTQDTGLPHYQGGTTLSIAGINESSFLSKRPSTSEVNSVNPKKSKPSEGVSGTNSSAVLSSVKSLSVTSSQAMPSKGTNTSS | |||||||||||||||||||
1 | 2pffB | 0.15 | 0.02 | 0.15 | 1.28 | MRFsearch | -------------------------------------------------------------------------------------------------------------------GVRVIVAGTLD------------------INPDDDYGFKQGGGGG------------------------- | |||||||||||||
2 | 5lj3W | 0.09 | 0.08 | 0.88 | 1.10 | SPARKS-K | -----------------MKFTPSIVIDAPQYYVDHNGKYNVDKCVILRDLQLETDSESMPSSLKHLTHILDLTNNDLIMIPDLSRRDDIHTLLLGR-----NNIVEVDGRLLPMNVQNLTLSNNSIRRFDLQRLRRAPRTLKNLTLIGNQVCHLANYREHVLRLVPHLETLDFQNVTAEERKSA- | |||||||||||||
3 | 5i65A | 0.05 | 0.03 | 0.68 | 0.65 | DisCoVER | DFLTKWTDFKCF--VSASNMRN-AAGQFIE---A----AYAKALRIELA-QLVQVDKVRGTLAKLEAFVAPQLSPGDIVVALGHTVGGIFDLKVGSTKHTLQAIETRVLAGSKMTVARVVD-TPPPAPVPIP-----------LPPKVL------------------------------------ | |||||||||||||
4 | 5kf6A | 0.06 | 0.04 | 0.78 | 0.67 | DEthreader | LN----STTGGQN-AM-IVDS-ALAQVVGDVITSA------AGQRAPVIAKFVPPTII---DLQRE------VFGPVLHVIRLDDVATGYGHVTSRIK--AGNLY-INRNIIGAVVGV-----------Q-PFGGRGLSG-KAGYLGPPQHSSALGLTLHAR-G--RILLQAATGNSQTGLRVSW | |||||||||||||
5 | 4c00A2 | 0.07 | 0.07 | 0.98 | 0.66 | CEthreader | RAINLRWSLDHFTQGEITNTTMLSRTRSRGGLMPTWGDSQRYSIDYSNTAWGSDVDFSVFQAQNVWIRTLYDRHRFV---TRGTLGWIETGDFDKVPPDLRFFAGGDRSIRGYKYKSIAPKYANGDLKGASKLITGSLEYQYNVTGKWWGAVFVDSGEAVSDIRRSDFKTGTGVGVRWESPVGPI | |||||||||||||
6 | 3l22A | 0.04 | 0.04 | 1.00 | 0.50 | EigenThreader | AYLAINKVNTFLQSLEGAAGENYDRYVQEAKFVRALAYYYLNPTPYSVNPDAKSVSTVKQIYEHILSDLENISALVTLIYKAPYFSQADTNIPNTQQSLAEYYYDGKILIDTKSGISLKFTDAKTKLQWYAETLLDLAECYANKAGGEATAKSLLKQVRGRSVDAATDPLNIDNLSEKYTWPIPQ | |||||||||||||
7 | 1eaqB | 0.20 | 0.10 | 0.49 | 0.24 | HHpred | --------------------------------------------------VRTDSPNFVLP----THWRSN------------------------KTLPIAFKVV--ALG-DVPDGTLVTVAGNDENYSAELRNATAAKNQ----VARFNDLRSGRGKS--FTLTITVFTNPPQVATY------- | |||||||||||||
8 | 1iufA1 | 0.21 | 0.03 | 0.13 | 0.57 | MRFsearch | --------SQPSVSQILSSKEKPWDVKRNRPP--------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 2xd8A3 | 0.09 | 0.08 | 0.94 | 0.41 | FFAS-3D | LYLKLFSGE------MFKGFQHETIARDLTKRTLKNGKSLQFIYTGRMTSS-FHTPGTPILGNADKAPPVAEKTIVMDDLLISS--ASATNFVEPGGTQIRVGSGTNESDAFTASALVNAAAAMDEKGPFLGKYGVKYGGTTGETSPGNLGSHIGPTP--ENANATGGVNNDYGTNAELGAKSCG | |||||||||||||
10 | 6zu9p | 0.08 | 0.08 | 0.98 | 1.06 | SPARKS-K | RNSSVSPNEKYLVTFSTEPIIVEEDNEFSFTKKNEGHQLCIWGLLMATFPVIKSPYLKWPLVRWSYNDKMVGDSLIVNFMPLEAKALKPSGIRDFSFAPEGVKLQPFRNGDEPSVLLAYWTPETNNSACTATIAEV----PRGRVLKTVNLVQVSNVTLHWQNQAEFLCFNVERHTKSGKTQFSN | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |