Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | FTLVLLVLSACGTDKQATEEQPKDTQNEASHDGHAHVTGDIQEETASADVLPTFLDSQSENIRLVYQIAGQSTEILEWMPCYCGCGESVGHKSNLNCFIQEKKQDGTIVWDDHGTRCAVCLEIALQSAKMHKDGMTLKEIRQTIDETYKNGYAKPTPTEMP |
1 | 6akfA | 0.05 | 0.03 | 0.67 | 0.71 | DisCoVER | | WLCTIVCCALPMWR--------------VS-AFIGSSIITAQITWEGLWMNCVVQYALPQDLQAARALIVVSILLAAITIAGVLFLLAALL---TLVAVAQKREMGAGLGWAAAALQ-LL--------------------------------GGALLAA-- |
2 | 5levA | 0.07 | 0.05 | 0.75 | 0.83 | DEthreader | | -GF-------------GHFA-----IS-AVF-IIL--FFPLALLCCLGLAASLLLMYVYLLAVFCTNAINIEAGQSLVIASIIVFNLHVLYFMIPFF-TT-------FMTFGVGIHFSTMLLF-FMPQVFNTLILLLLLQILGSAITFSIRYQ-------- |
3 | 2kw0A | 0.15 | 0.07 | 0.50 | 0.61 | CEthreader | | --------------------------------------------------------TIDVLQFKDEAQEQQFRQLTEELRCPKCQ-----NNSIADS------------------NSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGN-FVTYDPPLTP |
4 | 2wb1Y | 0.11 | 0.09 | 0.88 | 0.65 | EigenThreader | | EDLKNLISNKEVLVTRDEIDKIFDLAIKEYSEKKVPSTPMMTIYLTDEYKHD----------KEKALEVAR--------KLEYTKNTKIKGIKGIKRAIVQKKGDEYIILTDGSN-LSGVLAREIIIREISKVDVDMRHILLVADVMTRTGVVRQIGRHGV |
5 | 2kw0A | 0.16 | 0.08 | 0.49 | 0.54 | HHpred | | ---------------------------------------------------DVLQFK-DEA------QEQQFRQLTEELRCPKCQNN-----SIADS------------------NSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGN-FVTYDPPLTP |
6 | 2kw0A | 0.15 | 0.07 | 0.44 | 0.57 | MRFsearch | | ----------------------------------------------------DVLQFKDEAQEQQ------FRQLTEELRCPKCQNNSIA-----------------------DSNSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGNFV--------- |
7 | 2kw0A | 0.16 | 0.07 | 0.46 | 0.60 | FFAS-3D | | ---------------------------------------------------------KDEAQEQQFR------QLTEELRCPKCQNNSIAD-----------------------SNSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGN-FVTYDPPLTP |
8 | 2hl7A | 0.11 | 0.06 | 0.50 | 0.83 | SPARKS-K | | ----------------------------------------------GSHMAIDTYEFASD------AERERFRNLTQELRCPKCQNQ-----DIADS------------------NAPIAADLRKQIYGQLQQGKSDGEIVDYMVARYGDFVYKPP----- |
9 | 5utoA | 0.09 | 0.05 | 0.53 | 0.58 | CNFpred | | -----------------------------------------------------------GEWITKYEMLRDQ---YTDIIVICLSSGISGSYQSSYQAGEMVEGVNVHAFDSKL-AAMIEGCYVLRAIEMVEEGYEPQQIIDDLTNMRE------------ |
10 | 6tbuA | 0.06 | 0.04 | 0.78 | 0.83 | DEthreader | | LKRLNIVFNVLNFLTDFWEKPNFYSTILKFYNVQTLSHDTFV---------C-LAM-AA-SLAVLLCTNILIIYAVLTVSLS-IFNT-VAV---------------------VSTAIGLAVDFSLHYGIHYRMSATQVLIIGPTVMAATTTGLVIVWFYFS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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