Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | LLAVGLIPRFAGKTHTGDHIFLYEEMVVAGSIIGNLWSVFQLSINLGQWFLILFGFFAGIFVGCLALAIAEMLDTIPIFARRIGFRHGLGIVVLSVAFGKMLGSLIYFF |
1 | 5dn6J | 0.03 | 0.01 | 0.32 | 0.65 | DisCoVER | | ACGMAGAAMGVGNVAGMAFAEALGIFSFLVALLLL-------------------------------------------------------------------------- |
2 | 4jkvA2 | 0.09 | 0.07 | 0.85 | 1.00 | DEthreader | | ---------------GLCTLTLNACFVGVYAMAPFLTV-AILVAQGNYRYRAGFLAPIGLVLIVGGYFLIRGVMTLFSIKSNHPGLLSEKASNETLRLGIFGFLAFFGT |
3 | 6vq6g | 0.05 | 0.05 | 1.00 | 0.41 | CEthreader | | AMVFSAMGAAYGTAKSVVMAGIIAIYGLVVAVLIANSLTDGITLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALI |
4 | 6u8yH | 0.14 | 0.14 | 1.00 | 0.55 | EigenThreader | | VFMEITAISAYALTASMKYIVLGGIGSSFFLVGVALIYGATGNPTVVQVGLALIIFGLAVEAKLLIAMATLTVVFAELSAKRMIAYSSIGQVGLIALALSLFHMLNHAI |
5 | 4fc4A | 0.15 | 0.14 | 0.94 | 0.30 | HHpred | | ----DTINKCAANASANNPLGFWVSSAMAGAYVGLGIILILGNLLDPSVRPLVMGATFG--IALTLVIITGHTLTLGVKAGTISHGQMWAILPQTW-LGNLVGSVFVAL |
6 | 1kpkA | 0.12 | 0.12 | 0.98 | 0.20 | MRFsearch | | --LAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTIMYRIFNKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGFVA |
7 | 2rldA | 0.16 | 0.14 | 0.84 | 0.66 | FFAS-3D | | --------------REDKDNVVKDKSLEFAVRIVNLYKFLVNEQKEKQILRSGTSIGANIKLNIALKEANETEYWLELLIRTITREQYESINNDSTEINKLLISII--- |
8 | 3o7pA | 0.11 | 0.10 | 0.93 | 0.96 | SPARKS-K | | FIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIM-----NYTLFLVGLFIIAAGLGCLETAANPFVTVL---GPESSGHFRLNLAQTFASFGAIIAVVFGQS |
9 | 3rkoB | 0.12 | 0.11 | 0.95 | 0.79 | CNFpred | | LPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTM-----SQIGYMFLALGVQAWDAAIFHLM |
10 | 1f31A | 0.05 | 0.05 | 0.87 | 1.00 | DEthreader | | PNKKMQST--I------ELFDPSIITASFS-DLLL-I--P-V-VREKWSDMYGLIVAQWLSTTQFYTIKEGMYKALNYQAQALELNEGINQAIDNINNFINGCSVSYLM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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