Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | LASFAGKNRVLVITAPHDSDGYYRLMMSLLKPDVYCELAERHVHQIVMFHQEGEMGGKVRRITTEGKVMEEPLDTALIPRLMSFLKMEKGKFGMVLLKKTLQVEERYPYPVRLEAMYEVIDQSPMRKVE |
1 | 3drnA | 0.12 | 0.12 | 0.95 | 1.33 | DEthreader | | LSDYIGKHNIVLYFYPKDDTPGSTREASAFRD-NWDLLKDYDVVVIGVSSD---DINSHKRFKEKYKLPFILVSDP-DKKIRELYGAKGPARITFVIDKKGIIRHIYNSPANVNEALKALKQI-KEEEI |
2 | 1n8jT | 0.06 | 0.06 | 0.99 | 1.33 | DEthreader | | TEKDTEGRWSVFFFYPADFTFVSPTELGDVAD-HYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMRLDRATFVVDPQGIIQAIEVTGRDASDLLRKIKAAQYVAAH |
3 | 2rliA | 0.11 | 0.11 | 0.97 | 1.37 | HHpred | | KADFRGQ-WVLMYFGFT-HCPDCPDELEKLV-QVVRQLEAEPVQPVFITVDPERDVEAMARYVDFHPRLLGLTGSKQVAQASHSYRVYYHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMAAFR- |
4 | 3drnA | 0.13 | 0.12 | 0.92 | 0.57 | DisCoVER | | LSDYIGKHNIVLYFYPKDDTPGSTREASAFR-DNWDLLKDYDVVVIGVSSD---DINSHKRFKE-KYKLPFILVSDPDKKIRELYGAKLPARITFVIDKKGIIRHIYNPANHVNEALKALKQIK----- |
5 | 2v2gA | 0.12 | 0.12 | 0.99 | 0.43 | MRFsearch | | FHDWLGNSWGVLFSHPRDFTPVSTTELGRVI-QLEGDFKKRGVKLIALSCDNVADHKEWSEDVKCLSDMPYPIIADETRELAVKLGMPLTCRAVFIIGPDKKLKLSILYPRNFSEILRVIDSLQLTAQK |
6 | 3drnA | 0.12 | 0.12 | 0.96 | 1.54 | SPARKS-K | | LSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNW-DLLKDYDVVVIGVSSDD---INSHKRFKEKYK-LPFILVSDPDKKIRELYGAKGPARITFVIDKKGIIRHIYNSQMNVNEALKALKQIKEEEIS |
7 | 3sbcA | 0.07 | 0.07 | 0.95 | 0.66 | MAPalign | | AVSLYKGKYVVLAFIPLAFTFVSPTEIIAF-SEAAKKFEEQGAQVLFASTDSEYSLLAWTNIPRKEGGGPIPLLA--DHSLSRDYGVLVALRGLFIIDPKGVIRHITINGRNVDEALRLVEAF-QWT-- |
8 | 3sbcA | 0.09 | 0.09 | 0.98 | 0.48 | CEthreader | | LDKYKGK-YVVLAFIPLAFTFVSPTEIIAF-SEAAKKFEEQGAQVLFASTDSEYSLLAWTNIPRKEGGLGIPLLADTNHSLSRDYGVGVALRGLFIIDPKGVIRHITINGRNVDEALRLVEAFQWTDKN |
9 | 4nmuA | 0.14 | 0.12 | 0.90 | 0.86 | MUSTER | | LKDLKGK-GVFLNFWGT-WCKPCEKEP---YNELYPKYKEKGVEIIALDADETD--IAVKNFVNQ-YGLKFPVAIDKGQKIIGTYGV-GPLPTSFLIDKDGKVVEQIIGEQTKEQLEGYLKKI-TP--- |
10 | 2v2gA | 0.13 | 0.13 | 0.99 | 1.00 | HHsearch | | FHDWLGNSWGVLFSHPRDFTPVSTTELGRVI-QLEGDFKKRGVKLIALSCDNVADHKEWSEDVLSGGDMPYPIIADETRELAVKLGMVLTCRAVFIIGPDKKLKLSILYPANFSEILRVIDSLQLTAQK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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