>PF13761 (186 residues) LHPELRRRFSVGLASGELCVGRGVMDRIWHGRAFVKPFLALGGLRNILLPRTGRDVPFTI ENVPYLDSYGRETVTFVRTFDLPGGPRRFDATMVHSPERDCVLDYLGTHQHLASDLHPTV EPDGSLLITSGEHRFREGPVDVRVPELLAGRAEVRESFDERTGRFRIDVRVVNRHFGPLF GYQGSF |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | LHPELRRRFSVGLASGELCVGRGVMDRIWHGRAFVKPFLALGGLRNILLPRTGRDVPFTIENVPYLDSYGRETVTFVRTFDLPGGPRRFDATMVHSPERDCVLDYLGTHQHLASDLHPTVEPDGSLLITSGEHRFREGPVDVRVPELLAGRAEVRESFDERTGRFRIDVRVVNRHFGPLFGYQGSF | |||||||||||||||||||
1 | 3qq2A | 0.10 | 0.08 | 0.82 | 1.03 | EigenThreader | ---------------DAGGPWARTFSERQQINA-----------------YDQTVSGLEIGLDRGWSASGGRWYAGLLGYTYPGDGGLHVGGYAAYGGYDTVLRLGRDGGSGAAWSLEGELPNDWFQAEVMLWRTSRASKVDANGGNKSGRVELGAGVDAKGHNLYYEYAAGD--RINIPWSFHAG | |||||||||||||
2 | 2cznA | 0.03 | 0.01 | 0.38 | 0.71 | DisCoVER | ---VPVSGSLEVYDVTLNLDGQYDWTVKVKL--AP----------GATVGYVIFTPWNKGPTATFG---------------F----I-V----------------NGPQG----------------------------------------------------------------DKVEEITLEIN- | |||||||||||||
3 | 4tq2A | 0.13 | 0.10 | 0.75 | 1.00 | DEthreader | EGM-VEEFFERS-----VGSWRSLRSSHNIAA-------------------QLEEVNSDIDITQVADSLEPASIRMSWEGSSDEEVIKGSTVLVLYKDKGKLLRS-----VIPAVGEWTMQEDGTFVLHT-FY----------D---R-AAAEERIWFAT-PDLRMRCSIIKTQHKGVLTASLSTE | |||||||||||||
4 | 1zcwA | 0.07 | 0.06 | 0.97 | 0.62 | CEthreader | CARDKIYPLLSTFQDTLVEGGSVVVFSMASGRHSTELDFSISVPTSHGDPFPATGHPVDDLLADTQKHLPVSMFAIDGEV-----TGGFKKTYAFFPDKVQMTSMDYKKRQVNLYFSELVPNELGLKFCKRSFSVYP-TLNWETGKIDRLCFAVISNYAYVGEKRTLVYGLTLSPKEEYYKLGAYY | |||||||||||||
5 | 1zcwA | 0.06 | 0.04 | 0.77 | 0.87 | EigenThreader | AAGLLGKIYPLLSTFQDTLSVVVFSMASG----------------------RHSTELDFSISVP---TSPVSMFAIDGEV-----TGGFKKTYAFFPTDKVQMTSMDYKKRQVNLYFSELSAQTLSFSVYPTLNW-------ETG--KIDRLCFAVISNDPKRTLVYGLTLSPK---EEYYKLGAY | |||||||||||||
6 | 2c9iA | 0.14 | 0.12 | 0.82 | 0.28 | HHpred | ----------GKPY---EGTQSLNITITEGGPPFAFDILSHA-FIKVFAKYP-KEIPDFF-KQS--LP---GGFSWERVSTYEDGVLSATQETSLQ--GDCIICKVGPVQKKTCGWEPSTERDGLLLRDTP--ALMLDGGEVKLPEFHHLRMEKLNIS-DDWKTVEQHVVASYSQVPSK------- | |||||||||||||
7 | 5vtgA | 0.12 | 0.09 | 0.69 | 0.55 | MRFsearch | -----------------LFTLDGRVDVPWARIVVH--------------------DPINSNLIVHV-----GNNVRIDAFG---LKARLTGDLNVVQD----------KQGLGLNGQINIP-EGRFHAYGQDLIVRKGELLFSG-PPDQPYLNIEAIRNPDEDDVIAGVRVTGLADEPKAEIFSD- | |||||||||||||
8 | 2fr2A | 0.12 | 0.10 | 0.83 | 0.56 | FFAS-3D | LAPALQALSPL------LGSWAGRGAG---------------------KYPTIRPFEYLEEVVFAHVGKPFLTYTQQTRAVADGKPLHSETGYLRVCRPGCVELVLAHPSGITEIEVGTYSVTGVIELELST----RADGSIGLAPTAKEVTALDRSYRIDGDELSYSLQMRAVGQPLQDHLAAVL | |||||||||||||
9 | 6n2bA1 | 0.14 | 0.12 | 0.90 | 0.73 | SPARKS-K | LPNYKFTVRGGSIYSGERIQTQGEFKAIGVNN--------LICKGPEVIVNGG-GNSIEIKEIMYIQN------KLVFNGAPNTNPNTLNANKIYTGLG--GMELNGYGYEIYSDGEVQVKNYGNFEIGSIGIVKKLTNGRTTIKSG--ATLYCDQLEVRNNGRVFITLVTRAISISGGTIEGPGT | |||||||||||||
10 | 6w0pA | 0.08 | 0.06 | 0.70 | 0.99 | CNFpred | -----------------------------------HFTINSVNFF---------KIRIIHEDEELDLN-KVKFEDFKRILDLR--SGLYQRTFTWLTKIKIIISRLLDCENAYQMISFESDIDTDIKLELH------LDSNILHWGSDCYWNRVKEFKIG--NSIGLTVKTLTTNQTLTSVMRTNL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |