>PF13712 (212 residues) AFITCVNDDTLYDECLRYINNLEIPEGYEIDIISVREAESITSAYNNAMNSTDAKYKVYL HQDTLIVNKDFIKNIIDIFNLDEKIGMIGMVGAKNIPTNAYWWDDDEKYGKVYDSHIGSI QRLYFNEIDGRYEQVKAIDGFIMITQYDVKWRDDLFDGWHFYDISQSVEFNNKGYKVVIP NQEKFWCVHDCGLINASDIYIEKYRKIFIEEY |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
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Seq | AFITCVNDDTLYDECLRYINNLEIPEGYEIDIISVREAESITSAYNNAMNSTDAKYKVYLHQDTLIVNKDFIKNIIDIFNLDEKIGMIGMVGAKNIPTNAYWWDDDEKYGKVYDSHIGSIQRLYFNEIDGRYEQVKAIDGFIMITQYDVKWRDDLFDGWHFYDISQSVEFNNKGYKVVIPNQEKFWCVHDCGLINASDIYIEKYRKIFIEEY | |||||||||||||||||||
1 | 6pxuA | 0.10 | 0.09 | 0.93 | 1.33 | DEthreader | SVIIAFNEAWTLLRTVYSVLETSP-DILLEEVILVDDYRGLVRARLLGASAARGDVLTFLDCHCEC-HEGWLEPLLQRIHE-EESAVVCPVI-DVIDTFEYL---------PQIGGFDFTWHTVPERMPVDVIRSPTMAGGLFAVSKKFESYDTGMEVWGGENLEFSFRIWQCGGVLETHPC--SHVGHVFPQAPYSRNKALANSVRAAEVW | |||||||||||||
2 | 2nxvA | 0.16 | 0.14 | 0.91 | 2.91 | HHpred | SVCSLVRDQAKYDRLLESFERFGF-TPDKAEFLAADNRFHGFSWHKQMLPRCKGRYVIFCHEDVELVDRGYDDAIEALEEADPKWLVAGVAGSP-------WRPLNHSALHISDV-FGNDR-----RRGNVPCRVESLDECFLLMRRLVLNSYD-MQGFHYYGADLCLQAEFLGGRAYAIDF---HLHHYGRAIAD-ENF-HRLRQEMAQKY | |||||||||||||
3 | 4fixA3 | 0.13 | 0.11 | 0.86 | 0.86 | DisCoVER | AVGIPTFRPADCVNALRELTADLVD-QVIGAVIVPDQGLGGSGGYSRVMYEATCQQILFMDDDIRLE-PDSILRVLAMHRFAKAPMLVGGQML--NLQPSHLH----IMGEVVDRSIFMWTAAPHAEYLHRRIDVDYNGWWTCMIPRQVAQPL--PLFIKWDDADYGLRAAEHGYPTVTLPG--AAIWHMAWSDK----------------- | |||||||||||||
4 | 2nxvA | 0.14 | 0.13 | 0.92 | 0.45 | MRFsearch | SVCSLVRDQAKYDRLLESFERFGFTP-DKAEFLAADNRFHGFSWHKQMLPRCKGRYVIFCHEDVELV-DRGYDDLVAAIEALPKWLVAGVAGSPWRPLNHSVTAQALHISDVF---------GNDRRRGNVPCRVESLDECFLLMRRLKPNSYDM-QGFHYYGADLCLQAEFLGGRAYAID---FHLHHYGR--AIADENFHRLRQEMAQKY | |||||||||||||
5 | 2nxvA | 0.14 | 0.13 | 0.92 | 1.42 | SPARKS-K | SVCSLVRDQAKYDRLLESFERFGFTPD-KAEFLAADNRFHGFSWHKQMLPRCKGRYVIFCHEDVEL-VDRGYDDLVAAIEALPKWLVAGV---AGSPWRPLNHSVTAQALHISDVFGNDRRRGNVP------CRVESLDECFLLMRRLVLNSYD-MQGFHYYGADLCLQAEFLGGRAYAID---FHLHHYGRAIADE--NFHRLRQEMAQKY | |||||||||||||
6 | 2z86C2 | 0.11 | 0.09 | 0.84 | 0.84 | MAPalign | SIYIPAYCSKYIVRCVESALNQTI---TDLEVCICDDNKGIGSASNTAVRLCRGFYIGQLDSDDFLEPD-AVELCLDEFRKDLSLACVYTT-NRNIDREGNL----------------------ISNGYNWPIYLTMC-HHFRMFTARAGFNESIS---NAVDYDMYLKLSEV-GPFKHINK-ICYNRVLHGENTSIKKLDIQKENHFKVVN | |||||||||||||
7 | 2z86C2 | 0.13 | 0.11 | 0.90 | 0.66 | CEthreader | SIYIPANCSKYIVRCVESALNQTIT---DLEVCICDDGKGIGSASNTAVRLCRGFYIGQLDSDDFLE-PDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTSA-----------------MICHHFRMFTARAWNLTEGFNESIAVDYDMYLKLSEVG-PFKHINKICYNRVLHGENTSIKKLDIQKENHFKVVNE | |||||||||||||
8 | 2nxvA | 0.15 | 0.14 | 0.92 | 1.19 | MUSTER | SVCSLVRDQAKYDRLLESFERFGFTPD-KAEFLAADNQFHGFSWHKQMLPRCKGRYVIFCHEDVELV-DRGYDDLVAAIEALPKWLVAGVAGSPWRPLNHSVTAQ----ALHISDVFGNDRRRGNVP-----CRVESLDECFLLMRRLKLNSYD-MQGFHYYGADLCLQAEFLGGRAYAID---FHLHHYGRAIAD--ENFHRLRQEMAQKY | |||||||||||||
9 | 2ffuA | 0.11 | 0.10 | 0.96 | 1.97 | HHsearch | SVVITHNERSALLRTVVSVLKKSPPH-LIKEIILVDDYEGLMRSRVRGADAAQAKVLTFLDSHCEC-NEHWLEPLLERVAEDR-TRVVS---PIIDVMDNFQYVGASLKGGDWNLVFKWDYMTPRQGNPVAPIKTPMIAGGLFVMDKFYKYDMMMD-VWGGENLEISFRVWQCGGSLEIIPCS--RVGHVFRKQHGSGTVFARNTRRAAEVW | |||||||||||||
10 | 2nxvA | 0.14 | 0.13 | 0.92 | 1.75 | FFAS-3D | -VCSLVRDQAKYDRLLESFERFGFTPKAEFLAADNGNQFHGFSWHKQMLPRCKGRYVIFCHEDVEL-VDRGYDDLVAAIEADPKWLVAGVAGSPWRPLN----HSVTAQALHISDVFGNDRRR-----GNVPCRVESLDECFLLMRRLKPVLNSYDMQGFYYGADLCLQAEFLGGRAYAID---FHLHHYGRAIAD--ENFHRLRQEMAQKY | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |