>PF13705 (523 residues) FTDVILRVPPLFIIDELLRIGLGFSSENVVLDNTEHAYSEYLYRYLYCQTYFIIVLKFLC CCIGCIAAICTFMLWTKHLIMVYLYLIPVGAIFVSYWSNVSTMKAIISYVSTQDSTPSIL DSILRLDLKILFNEGAGFLVIQNYTLQCMLASLFCYLHLAPRHPILQKLLILSFMAPSIL GICPVPTQVLYHAPVFAALLPLAVCKFIIWYNGITMLKTIYTGYQHAHNFISNYGLSALV ETEWLRLNVPCVLRMFWILRVGGQIIEILANHYGEETFNYYMMMKTLLVNGCETLTAVLG MTSIISYICHYIGCFFQWVLLTEDGDEKSIGTVSAILFYMLALQTGLTSLDKDKRLVRLC RNFCLLFTAVLHCVHNIVNPLLMSLSASHNPALHRHLRALGVCVFLILFPVSLLIFLWSH YTVSTWLLAVSVFSVEVIVKVLVSLAIYSLFLIDAYRSVFWEQLDDCVYIIRSFGNTIEF AFGIILFFNGFWILVFESGGTIRAIMMCIHAYFNIWCEAQAGW |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | FTDVILRVPPLFIIDELLRIGLGFSSENVVLDNTEHAYSEYLYRYLYCQTYFIIVLKFLCCCIGCIAAICTFMLWTKHLIMVYLYLIPVGAIFVSYWSNVSTMKAIISYVSTQDSTPSILDSILRLDLKILFNEGAGFLVIQNYTLQCMLASLFCYLHLAPRHPILQKLLILSFMAPSILGICPVPTQVLYHAPVFAALLPLAVCKFIIWYNGITMLKTIYTGYQHAHNFISNYGLSALVETEWLRLNVPCVLRMFWILRVGGQIIEILANHYGEETFNYYMMMKTLLVNGCETLTAVLGMTSIISYICHYIGCFFQWVLLTEDGDEKSIGTVSAILFYMLALQTGLTSLDKDKRLVRLCRNFCLLFTAVLHCVHNIVNPLLMSLSASHNPALHRHLRALGVCVFLILFPVSLLIFLWSHYTVSTWLLAVSVFSVEVIVKVLVSLAIYSLFLIDAYRSVFWEQLDDCVYIIRSFGNTIEFAFGIILFFNGFWILVFESGGTIRAIMMCIHAYFNIWCEAQAGW | |||||||||||||||||||
1 | 5xsyA | 0.10 | 0.10 | 0.94 | 1.35 | FFAS-3D | ----------IFAAEMVLK--IIALDPYYYFQQTWNIFDSIIVSLSLLELSVLRSLRLLRIFLNILIKIICNSVGLGNLTIVLAIIVFIFALVGFQLFGKNYKEYVCKISDDCELPRWHMNDFFHSFLIVFRALCLAVYMMVIIIGNLVMLNLFLALLLSSFHDYFETFIIFMILLSSGVLAFEDIKVILEYADKVFTYVFIVEMLLKWVA--YGFKRYFTDAWCWLDFVIVGASIMGITSSLIKNLRTIRALRPLRALSRGMKVVVRALLGAIPSIMNVLLVCLMFWL-----IFSIMGVNLFAGYLSLLQMDIMYAAVDSREVEIYEINVYMYLYFVIFIVFGA---------FFTLNLFIGVIIDNFVYDIVTCINMVAMMVESEDQSQVKKDILSQINVIFVIIFTVECLLKLLALFFTVGWFAVVVISIIGLLFRVIRLARIARVLRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVTFGNSMICLFEITTSAWDGL---- | |||||||||||||
2 | 5ifeC | 0.11 | 0.11 | 0.98 | 1.08 | SPARKS-K | DEDYYARVEGREIISNLAKAAISTMRPDIDNMDEYVRAFAVVASALGIPSLLPFLKAVQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVRTISALAIAALAEAATP--YGIESFDSVLKPLWKGIRQHRGK--------GLAAFLKAIGYLIPLMD--AEYANYYTREVMLILIREFQSDEEMKKIVLKVVKQCCANYIKTEILPPFFKHFRNYRQLVDTTVELANKVGAAEIISRIVDDLKYRKMVMETIEKIMGNLGILYAFQEQTTEDSVMLNGFGTVVNALGKVRQQAADLISRTAVVMKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPLPRLTPILKVQENCIDLVGRIADRICFELLELLKAHKKAIRRATVNTFGYIAKAIVCTTVAIAIVAETCSPFTVLPALMNEYQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALVHRQTASAVVQHMSLGVHLLNYVWPNVFESPHVIQAVMGALEGLRVAICRMLQYC | |||||||||||||
3 | 2a65A | 0.11 | 0.09 | 0.84 | 1.67 | CNFpred | ------------------------------------------------GLILAMAGNAVGLGNFLRFPVQAAENGGGAFMIPYILLVGIPLMWIEWAMGRYGGAQ---------GHGTTPAIFYLLWRNRFAKILGVFGLWIPLVVAIYYVYIESWTLGFA-DPDSILRPFKEFLYSYIGVPILKPSLFAYIVFLITMFINVSILIRGISKGIERFAKIAMPTLFILAVFLVIRVAADGLNFLWPGVWIAAVGQIFFTLSLGFGAIITYASYV---DQDIVLSGLTAATLNEKAEVILGGSISIPAAVAFFGVANAVAIAKA---------GAFNLGFITLPAIFSQT----AGGTFLGFLWFFLLFFAGLTSSIAIMQPMIAFLEDELKLSRKHAVLWTAAIVFFSAHLVMFLNKSLD------EMDFWAGTIGVVFFGLTELIIFFWIFGADKAWEEINRG-VPRIYYYVMRYITPAFLAVLLVVWA-THWTVWITRFYIIGLFLFLTFLVFLAERRRNHE | |||||||||||||
4 | 5xjjA | 0.06 | 0.04 | 0.71 | 0.96 | DisCoVER | RLAAPMATVTIAQYLLPVISVMVAGHNGELQLSG---VALAT---SFTNVTG---FSIMYGLVG-ALETLCGQAYGAKQYEKIGTYTYSAIASNIPICFIISIIWFYIELPDISRIAGSY-----------A---FWLIPVLFAQAIVIPLTRFLLTQGVL---PLLYTAVTTLLFHVFVCGSNGPAMATSVSFWFYAVILTRGFVSDFVSCVKQFFQYG----------------V--PS-AAMICLEWWLLILCS---------------------------------GLLSNPKLETSVLS-------------ICET--------LH---------YVISSGVAAAVST--RVSNNLGAGNPGLCLWVESAFFSILLFFRNVVDYVADL-SPLLCLSFILDG--FT-AVLNGVARGSGQHIGAWNNIFS---------YYLVGAPVGVYLAFRHDLNGKGLWCGVVIG-------------STVQATVLAIVTASM------WKEQAEKARR------- | |||||||||||||
5 | 2y8nA | 0.06 | 0.04 | 0.68 | 0.67 | DEthreader | IAQLMDYYTLKVTADMEAAYWYNRTWWEN---------DGEVIEVRRAKAVASPFPWVCA-FF--DSVVGAGGG-----------I-QGREVINYYMPLYGFDGIIKLCDEK-----LSA-CENYSKRAKY----MGNIAH-PWEAIQMTLC-H----------GLSIGRLGQVLQ-FY-------------------------EC--SAGVSGGVLS-GNTFNNLSLTLEYLVDFLMKAASCTKLGLGYPAWMNNQTGMNFMMRNYGPEGM-D-----L-HDA-RA-----------------------IGMPKVLELVLNKKLDSYENSLSSITAMLNNFKTAYETVFSPDFREFACVNAPKYGADEIFKAYHYYIYDMTHKFRSYY---L--LCQISTH-QGYSDGSVSAAAGTD--K---NGIYAIFESATVYDHSMHQNA--------------------------------------------------GTRKLLDLQFNVRVAGIKPIQDEVIY-- | |||||||||||||
6 | 5xjjA | 0.08 | 0.07 | 0.84 | 0.64 | CEthreader | ELKRVTRLAAPMATVTIAQYLLPVISVMVAGHNGELQLSGVALATSFTNVTGFSIMYGLVGALETLCGQAYGAKQYEKIGTYTYSAIASNIPICFIISIIWFY-------------IENILISLGQDPDISRIAGSYAFWLIPVLFAQAIVIPLTRFLLTQGLVLPLLYTAVTTLLFHVFVCWVFVLVFVLGSNGPAMATSVSFWFYAVILSCYVRFS-----SSCEKTRGFVSEDFVSCVKQFFQYGVPSAAMICLEWWLFELLILCSGLLSNPKLETSVLSICLTTETLHYVISSGVAAAVSTRVSNNLGAGNPQVARVSVLAGLCLWLVESAFFSILLFTIGYAFSNSKEVVDYVADLSPLLCLSFILDGFTAVLNGVARGSG-------WQHIGAWNNIFSYYLVGAPVGVYLAFRHDLNGKGLWCGVVIGSTVQATVLAIVTASMNWKEQAEKARKRI------------------------------------------------------------ | |||||||||||||
7 | 4hnwA | 0.05 | 0.04 | 0.93 | 0.95 | EigenThreader | DLYSVGEKDDAASYVANAIRKIESASPICCHVLGKEYKESIKWFTAALNNDLATLQSQIKNALVSRKKYWEAFLGY------RANWTSLAVAQDVNQAINTLSQFEKLAEGKISDSE----------------------KYEHSECLMYKNDIMYKAAS--DNQDKLQNVLKHLNDIEPCV---FDKFGLLERKATIYMKLKDASIVYRTLIKRNLEVSLGLKKALYGKLEQFYCEPPKFIPLTFSPLLEKIVLDYLSGFIWTNYYLSQHFLFLKDFPKAQEYIDAALDHTPTLVEFYILKARILKHLDTAAGILEEGRQLDLQDRFINCKTVKYFLRAKAVEVASLFTKNG-----IKDLHLVWFIVEQAEAYYRLYLDRKKKLDDLASENQWLVRKYKGLALKRFNAIPKFYKQFEDDQLDTPRAYLEMLEWGKMYVRAMKEASKLYFQMHDDRLKRSQETSTPMEDFATEFYNNYSMQVILDFEFNYRIGALCFASLNKFAKRFGLFGSMAIVLLHATRN | |||||||||||||
8 | 5v6pA | 0.14 | 0.06 | 0.46 | 0.61 | HHpred | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VVVTYLLTFYCVYSATKTS-----VSFLQVTLK----LNEG-FNLMVLSIFILLNSTLLWQLLTKLLFGELEHIFERLPF-TIINTLFMS----SLFH-ERYF--FTVAFFGLLLLYLKVFHWILKDRLEALLQSINDSTLIFSRFSFNLVLLAVVDYQIITRCISSIIESTSLYLIVMEFTMLLIDLLNLFLQTCLNFWEFYRSQQSGKF-MYEKAIDVFTRFLKTALHLS-----MLIPFRMPMMLLKDVVWDILA---LYQSGTS-- | |||||||||||||
9 | 6ftg5 | 0.10 | 0.07 | 0.73 | 0.52 | MRFsearch | ---KLLILSMAAVLSFSTRLFAVLRFESVIH-----------EFDPYFNYRTTRFLAGLMITSAAIYHVLHFFHDIRNVCVFLAPLFSSFTTIVTYHLTKELKD-------------------------------AGAGLLAAAMIAVVPGYISRSVAGSYDNEGIAIFCMLLTYYMWIKAVK--------TGSIYWAAKCALAYFYMVSSWGGYVFLINLIPLHVLVLMLTG----------RFSHRIYVAYCTVYCLGTILSMQISFVGFQPV-----------------LSSEHMAAFGVFGLCQIHAFVDYLRSKL-------------------------------NPQQFEVLFRSVISLVGFVLLTVGALLMLIIASVSEHQPTTWSSYYFDLQLLVFMFPVGLYYCFS--------------NLSDARIFIIMYGVTSMYFSAV--------------MVRLMLVLAPVMCILSGIGVSQVLSTYMKASGMILVMAFFLITYTFHSTWVTSEA-- | |||||||||||||
10 | 5x0mA | 0.09 | 0.09 | 0.96 | 1.33 | FFAS-3D | -------FTSIYIVEAVLKI--IALSPKFYFKDSWNVFDFIIVVFAILELGLFRSFRLLRVFRLAFMSVMTKSYGAFVNVMYVMFLLLFIFAIIGMQLFGMNYIDNMERFPDGDLPRWNFTDFLHWDCMLVGDWSCIPFFVNLVILNLLIALLLNVCFLLAKNKYFQKFVTAVLVITSVLLALEDIVNITLYVDYVLTAFFVIEMIIMLFAYWLDFIVVVAYLLNFVFRLFRPLSKVNGMQVVTSTLAVPHIFNVILVGIFFWLVFAIMGVQLFATFKGWLQIMNDAIDSRTNIYMYLYFIFFIVCILIDIFRQQRRKAEGLSATDSRTQLIYRRAVMRTMSAKPVKRIPKPTCHPQSLMYDISVFEYTMMILI--ILNVAVMAIDHYGQSMEFSEVLDYLNLIFIIIFFVECVIKVSGLYFKDPWFLYVVLAIAGLLLRILRILRVGRLLRY----FQSARGMRLLLLALRKALRTLFNVSFLLFVIMFVYAVFFKTFGQSIILLFQLATWDGVYFAI---- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |