>PF13694 (196 residues) KLHRQVIPDYTSASTAMFSDCMFNTEPDKVRSLDTMKSSGLSPKHPFNVVATFKGRFPQH STLSNAPGSGTAAKDHLPLPRKVQHQQHPAHRHYKHNDRDSVKSPSRSFVKDKKRLVHRF LKSMEPSSSAQSKEPSTLAPPFNPILPNTMSKPSKDSSIRHSHISNNSSSSQTDISLQSL LYHDLEMSPKREVSSS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | KLHRQVIPDYTSASTAMFSDCMFNTEPDKVRSLDTMKSSGLSPKHPFNVVATFKGRFPQHSTLSNAPGSGTAAKDHLPLPRKVQHQQHPAHRHYKHNDRDSVKSPSRSFVKDKKRLVHRFLKSMEPSSSAQSKEPSTLAPPFNPILPNTMSKPSKDSSIRHSHISNNSSSSQTDISLQSLLYHDLEMSPKREVSSS | |||||||||||||||||||
1 | 3j0fI3 | 0.06 | 0.06 | 0.87 | 0.71 | DisCoVER | GREGKKIPCTVYDRLKTTAGYIT------MHRPRPHAYTYLE---EGKVYAKPPKNITYECKCYKGTVSTRTEITGCTAIQCVAYKSDQTKWVFNSLIRHDQGKLH-LPF-KLIP-ST--CMVPVAHAPNVIHGFKHISLQLDTHLTLLTTRRLGPEPTTEWIVGKTVRNFTVDRDGLE--Y--------IWGNH- | |||||||||||||
2 | 4zg4E | 0.05 | 0.04 | 0.78 | 0.83 | DEthreader | VSGEKTSGKYSTY-LL--EKSRVVFQSERNFYQLC-HLKLGAEFNYTM-I--LGNVLFCVAWLCMTRPQANARALAKKIYAH--L----------------------FDFIVE----IYGFEQFNYEKQQIDL-----IEA--GILELLDEE-CLLGTDWLLFYKCE-GFLEKNRTVGSKFRSSLYLLMLYRACGV | |||||||||||||
3 | 3c9vN | 0.07 | 0.07 | 1.00 | 0.46 | CEthreader | ATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAVALIRVASKLADLRGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVA | |||||||||||||
4 | 3j1zP | 0.05 | 0.05 | 0.99 | 0.52 | EigenThreader | GKAEPLAALAQSAFIMGSAFLLLFYGGERLLNPSPVENATLGVVVSVVAIVLTLALVLLQKRALAATNSTVVEADSLHYKSDLFLNAAVLLVLSQYGWWWADGLFAVLIACYIGQQAFDLGYRSIQALLDRELDEDTRQRIKLIAKEDPRVLGLHDLRFHLEGNLSLNEAHSITDTTGLRVKAAFEDAQVEPTTQ- | |||||||||||||
5 | 2dhrA | 0.10 | 0.06 | 0.58 | 0.32 | HHpred | -------------------------------------------RVPFITASGS-------DFVEMFVGVGALFETAIVFIDEIDGRKRG--------------SGVGGGNDEREQTLNQLLVEMDGFEKDT----AIV------VM-AATNRPDIDPALLRPGRFDRQIDAPDVKGREQILRIHARGKP------- | |||||||||||||
6 | 2pffB | 0.10 | 0.03 | 0.24 | 0.45 | MRFsearch | ---------------------------------------------------------PDDDYGFKQGGGGGGGG-------------------------------LYKTSKAAQDVWNRADNHFK-------------------------------------------------DTYGFSILDIV----------- | |||||||||||||
7 | 2xd8A3 | 0.12 | 0.12 | 0.97 | 0.40 | FFAS-3D | ------ATDKYALYLKLFSGEMFKGFQHETIARDLTLKNGKSLQFIYTGRMTSSFHTPGTPILGNADKAPPVAEKTIVMDDLLISSASATNFVEPGGTQIRVGSGTNESAFTASALVNAFYDAAAFLGKYGVKYGGTTGETSPGNLGSHIGPTPENANATGGVNNDYGTNAELGAKSCGLIFQEAIGPQVQVTNGD | |||||||||||||
8 | 5yfpH2 | 0.10 | 0.09 | 0.90 | 1.08 | SPARKS-K | RRDRSSVLILEKFWDTELDQLFKNVEGAQKFINSTKGRHILMNSANWMELNTTTGKPLQMVQDKSRDKQNDFIVSQCYPLKDVTVTQEEFSTKRLLFSNSNSSLYECRDADECSRLLDVIRKAKDDLCDIFHVEEENSKRIRESFRYLQSTQQTPGRENNRSPNKNKRRSMGGSITP------------------- | |||||||||||||
9 | 4on3A | 0.24 | 0.06 | 0.25 | 0.45 | CNFpred | ---------------------------------------------------------------------------------------------------------NRQHVDQRRQGLEDFLRKVL-----------------NALLL-------------------------SDSSLHLFLQSHLNSEDIEACVSG | |||||||||||||
10 | 5fj8A | 0.04 | 0.04 | 0.82 | 0.83 | DEthreader | HIGYKKG-RKSLEDLSVR-VQTYGGDGLDMQPVNFNW--A-RDFYHLREYINGKATALALRKSRG-----MLGLLSRISEKSVRKFLEIALFKYRKARL--E-PGTA-IGAIGAQSIGEPVPRIKEI--VISPIDEGYGLDVCTDG--V-----------I---S--R-TTTAYSIIEILGMVLGIGLSRLHDAAF | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |