Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | KDVRTIQKYIQIFEKSYLIFTLSPFSKNKRDEIGKTQKIYFYDLGIRNALINNFTDINLRPDRGQLFENFIITECLKANQYLNAGYALHFWRTKHQAEVDLVLQKQEQLIGIEIKYS |
1 | 6sceA3 | 0.11 | 0.09 | 0.82 | 0.94 | DisCoVER | | ------------------WEEGRPELALRGYRFEEEYPDARPLAEEILRRWVLVRRFLPPRLKGLPLEYAVYSHLNAHLAP--KGGQARGGHLVPLTEVDGVFFHRGALWFVECKP- |
2 | 2wmfA | 0.08 | 0.06 | 0.74 | 0.83 | DEthreader | | IR--DDAGTDSIVSWNWGS------------------MNVYTVY-NF--ECATFMDVPTPAFTGIIPFFRHAIQNPA--S-----GNSWYIYLDLTPTYAVVKENPNNLHILLNNYR |
3 | 6sceA3 | 0.13 | 0.11 | 0.87 | 0.97 | CEthreader | | -------------EVPWEEGRPEDLLALRGYRFEEEYPDARPDPGLLALAEEILRRWDEVLVKGLPLEYAVYSHLNAHLAP--KGGQARGGHLVPLTEVDGVFFHRGALWFVECKPT |
4 | 5h1aA | 0.06 | 0.05 | 0.90 | 0.62 | EigenThreader | | LPSSTAHRVVDEMVLVGILERGI------------DGKVRLGMRLWELALRGSMALRLRQVARVQQRVRELMLLAHARLLANAYRAGYVAAPGIEAVATGIAVPIRGVALSAVQPLQ |
5 | 1xmxA | 0.11 | 0.09 | 0.78 | 0.55 | HHpred | | -GYRELNLLLSDLVEAKIAS----YE---------NGILTFINEEARRFANG------------EWLETLVHSTVKQIQDDQDRSLNVVYRQREVRNELDVATVVNNKLHIIECKTK |
6 | 1xmxA | 0.13 | 0.10 | 0.77 | 0.97 | MRFsearch | | --YRELNLLLSDLVEAKIASYE-------------NGILTFINEEARRFA------------NGEWLETLVHSTVKQIQDDMDRSLNVQVYRQLVRNELDVATVVNNKLHIIECKTK |
7 | 1xmxA3 | 0.18 | 0.11 | 0.62 | 0.57 | FFAS-3D | | -DRITIADYLTI----------------------FGARGE----------------------FNEWLETLVHSTVKQIQDDMPTILNVQVYRQLGENELDVATVVNNKLHIIECKTK |
8 | 4chdA | 0.13 | 0.11 | 0.85 | 0.67 | SPARKS-K | | LHAERCKEFVGNMLEETTVQSLVPI-----------------NTWGKSAKRKLQEEITSDPCPRKRAKMSYLAIIAGSIQDRQTNVPRAFMLRGSQIEYDLVVDTTNRIIVGGETVL |
9 | 1xmxA | 0.12 | 0.09 | 0.76 | 0.83 | CNFpred | | --YRELNLLLSDLVEAKIASYE-------------NGILTFINEEARRFANG------------EWLETLVHSTVKQIQDDMP-SLNVQVYRQEVRNELDVATVVNNKLHIIECKTK |
10 | 1xmxA | 0.12 | 0.09 | 0.74 | 0.83 | DEthreader | | -----------------------TIAYLTARGE-F-N--LDQQLQLDLKIASY--IL--RRFNGEWLETLVHSTVKQIQDDMPTIQDRSNVQVYVRNELDVATVVNNKLHIIECKTK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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