Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | VQVTFAKTVHIIFPSAVKYVDLGSNYIIAGKADGAENVVRVKATTEGFPGETNFSVICEDGSFYSFNAKYAHEPEMLNIEMKDFLENEDTTDFSHTRMNIYFRELGNESPLLVKLIMQSIYKNNDREIKHLGCKRFGVQFLVKGIYSHNGLFYFHTQVRNSSNVPFDTDFIRFKIVDKKVAKRTAIQETVIDPVRSYNEILVIDGKSTVRTVYTVPQFTIPDDKVLVIELMEKNGGRHQTIRVENSDVVAAKV |
1 | 1xksA | 0.11 | 0.09 | 0.83 | 1.21 | CNFpred | | LTAVQGGSFILSSSSQLIRLIPESGKIHQHILP-DLTLSSVLWDR----ERSSFYSLTS-SNISKWELDD--SSEKHAYSWDI-------------------------NRALKENITDAIWGS-ESNYEAIK---EGVNIRYLDLKQNCDGLVILAAAWHSADNPCLIYYSLITIEDNGCQMSDAVTVEVTQYNPPF-LCQLTVPNFSNQTAYLYNE-----SAVYVCSTGTG-SLPQEKIVFNADSVLGAGA |
2 | 5ghuA | 0.08 | 0.05 | 0.66 | 0.67 | DisCoVER | | VIYKSSVNVRLENNPLLVQSWLDTVPFTATPPVSRIGQTIKLMYTASLESVFWFNVLEVPPFRTRIKLFYRP-D------------------------------------------------------GLKGNPSEAPLALKWFWSG--SKASLRVTNPTP--YYV-S-FSSGDLEAS---------GKRYPID-VK----MIAP-FSDEVMKVNGLNGKANSAKVHFYAINDF-GGAIEGNA-R-------- |
3 | 4eqvA | 0.06 | 0.04 | 0.68 | 0.67 | DEthreader | | ---------VHFTPMNPNGLWYDE-------------------------KDAKWHLYFQYWGHATS-DD------TNWEDQPIAIASYSLDGGKVFGLQAWASNWEYS-------S--RFLKAEPILNIAWSRFTNTT---------------LEFELVY---AVNTADLSLWFKGLE------DPEEYLRMLRMSVNNQPFKSESYYKVFVSTNTYFMTTGNAGSVNMTTGVDNFYIKFQVRE-VK------ |
4 | 3hs0F | 0.06 | 0.06 | 1.00 | 0.72 | CEthreader | | LRTDTEEQILVEAPKQLDIFVHDFQTRVDMNPAGGMLVTPTIEIPAKEVNQYVVVQVTGPQVRLEKVVLLSYQSSIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYEHSPENYTAYFDVRKYVLPSFEVRLQPSEKGNENFHVSITARYLYGEEVEG-VAFVLFGVKIDDAKKSIPDSLTRIPIIDGDGKATLKRDTFRSRFPNLNELVGHTLYASVTVMTESGSDMVVTEQSGIHIVASPY |
5 | 4hjjL | 0.08 | 0.07 | 0.81 | 0.77 | EigenThreader | | MQSPRATINCKASQSVSNDIYYASDRFSGSGGT----DFTLTISSLEAEDVAVYYCQQDYNWTFGGGTKIKRTVAASCRASESISSNGQAPASTDIPARISSLQSEDFAP-------------SITFGQGTRLEIKAPSVFIFPPAS----VVCLLNNFY-----PREAKVQWKVD------------NALQNSQETEQDSKD---STYSLSSTLTLADYEKHKVYACEVTHQGLSSPVTKSNRGE------- |
6 | 4r4gA1 | 0.13 | 0.06 | 0.44 | 0.33 | HHpred | | --------------------------------------------------------------------------------------------------------------------------------SETEKSSDIAQVKIKDVSYTLLVLKVNVAVKNTGKDPLNVD-SDFTLYQGD-TK-SD-TD-----PEDYKQGSTINADKSVEGNLFFV---VDKGKQYELNYTPESGDKSVTFKIDGKKILATA- |
7 | 1xksA | 0.12 | 0.09 | 0.79 | 0.53 | MRFsearch | | -------SFILSSSSQLIRLIPESGKIHQHILPSDLTLSSVLWDR----ERSSFYSLTS-SNISKWELDD--SSEKHAYSWDI-------------------------NRALKENITDAIWGSES----NYEAIKEGVNIRYLDLKQNCDGLVILAAAWHSADNPCLIYYSLITIEDN---GCQMSDAVTVE-VTQYNLCQLTVPNFSNQTAYLYNE-----SAVYVCSTGTGLPQEKIVFNAQGDSVLGA-- |
8 | 4r4gA1 | 0.13 | 0.06 | 0.45 | 0.62 | FFAS-3D | | --------------------------------------------------------------------------------------------------------------------------------SETEKSSDIAQVKIKDVSYTLPVLKVNVAVKNTGKDPLNVDDFTLYQGDTKSDTDPEDYSEKL-------QGSTINADKSVEGNLF---FVVDKGKQYELNYTPESYGKSVTFKIDKKILATAD- |
9 | 4es8A | 0.14 | 0.12 | 0.83 | 0.79 | SPARKS-K | | REHNEVKDS---------YIKIDKQSIAARYKTTAPYSVAFKVNTKSLIKDHDYKITFESGITVDYRIGSANKTTDDSFKI---------SDESKYASNVKIEG-------------------EEQGFKQREQGDKTISFRTL-----KEGLVLLSKVEKKPQGDLDVEFKNLKIIDVTNYVGNKNVQLTLKSISLFNSTVTVTKDQQNPISITLSAKSLKNKEKLKVSIKQKQSKKTFFFEVGIDPKVEAK- |
10 | 5a6dA | 0.06 | 0.05 | 0.79 | 1.00 | CNFpred | | FKITE-EGVSMRAMVVLIDLNLPFSKYEVEE----PETIGINMD-KRGKSKDTLILRKGDENFLEITFEGT---AKRTFRLPLIDVEELELELPELPFTAKVVL----LGEVLKEAIKDASLV----------------SDSLKFIAKEDEFTMKAEGEVEIKLTLEEGLLDLEVEE--------ETRSAYGISYLADMVKGIGKADEVTLRFGT-------EMPLQMDYFIR-DEGKLTFLLA--------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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