>PF13595 (253 residues) VQVTFAKTVHIIFPSAVKYVDLGSNYIIAGKADGAENVVRVKATTEGFPGETNFSVICED GSFYSFNAKYAHEPEMLNIEMKDFLENEDTTDFSHTRMNIYFRELGNESPLLVKLIMQSI YKNNDREIKHLGCKRFGVQFLVKGIYSHNGLFYFHTQVRNSSNVPFDTDFIRFKIVDKKV AKRTAIQETVIDPVRSYNEILVIDGKSTVRTVYTVPQFTIPDDKVLVIELMEKNGGRHQT IRVENSDVVAAKV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | VQVTFAKTVHIIFPSAVKYVDLGSNYIIAGKADGAENVVRVKATTEGFPGETNFSVICEDGSFYSFNAKYAHEPEMLNIEMKDFLENEDTTDFSHTRMNIYFRELGNESPLLVKLIMQSIYKNNDREIKHLGCKRFGVQFLVKGIYSHNGLFYFHTQVRNSSNVPFDTDFIRFKIVDKKVAKRTAIQETVIDPVRSYNEILVIDGKSTVRTVYTVPQFTIPDDKVLVIELMEKNGGRHQTIRVENSDVVAAKV | |||||||||||||||||||
1 | 1xksA | 0.11 | 0.09 | 0.83 | 1.21 | CNFpred | LTAVQGGSFILSSSSQLIRLIPESGKIHQHILP-DLTLSSVLWDR----ERSSFYSLTS-SNISKWELDD--SSEKHAYSWDI-------------------------NRALKENITDAIWGS-ESNYEAIK---EGVNIRYLDLKQNCDGLVILAAAWHSADNPCLIYYSLITIEDNGCQMSDAVTVEVTQYNPPF-LCQLTVPNFSNQTAYLYNE-----SAVYVCSTGTG-SLPQEKIVFNADSVLGAGA | |||||||||||||
2 | 5ghuA | 0.08 | 0.05 | 0.66 | 0.67 | DisCoVER | VIYKSSVNVRLENNPLLVQSWLDTVPFTATPPVSRIGQTIKLMYTASLESVFWFNVLEVPPFRTRIKLFYRP-D------------------------------------------------------GLKGNPSEAPLALKWFWSG--SKASLRVTNPTP--YYV-S-FSSGDLEAS---------GKRYPID-VK----MIAP-FSDEVMKVNGLNGKANSAKVHFYAINDF-GGAIEGNA-R-------- | |||||||||||||
3 | 4eqvA | 0.06 | 0.04 | 0.68 | 0.67 | DEthreader | ---------VHFTPMNPNGLWYDE-------------------------KDAKWHLYFQYWGHATS-DD------TNWEDQPIAIASYSLDGGKVFGLQAWASNWEYS-------S--RFLKAEPILNIAWSRFTNTT---------------LEFELVY---AVNTADLSLWFKGLE------DPEEYLRMLRMSVNNQPFKSESYYKVFVSTNTYFMTTGNAGSVNMTTGVDNFYIKFQVRE-VK------ | |||||||||||||
4 | 3hs0F | 0.06 | 0.06 | 1.00 | 0.72 | CEthreader | LRTDTEEQILVEAPKQLDIFVHDFQTRVDMNPAGGMLVTPTIEIPAKEVNQYVVVQVTGPQVRLEKVVLLSYQSSIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYEHSPENYTAYFDVRKYVLPSFEVRLQPSEKGNENFHVSITARYLYGEEVEG-VAFVLFGVKIDDAKKSIPDSLTRIPIIDGDGKATLKRDTFRSRFPNLNELVGHTLYASVTVMTESGSDMVVTEQSGIHIVASPY | |||||||||||||
5 | 4hjjL | 0.08 | 0.07 | 0.81 | 0.77 | EigenThreader | MQSPRATINCKASQSVSNDIYYASDRFSGSGGT----DFTLTISSLEAEDVAVYYCQQDYNWTFGGGTKIKRTVAASCRASESISSNGQAPASTDIPARISSLQSEDFAP-------------SITFGQGTRLEIKAPSVFIFPPAS----VVCLLNNFY-----PREAKVQWKVD------------NALQNSQETEQDSKD---STYSLSSTLTLADYEKHKVYACEVTHQGLSSPVTKSNRGE------- | |||||||||||||
6 | 4r4gA1 | 0.13 | 0.06 | 0.44 | 0.33 | HHpred | --------------------------------------------------------------------------------------------------------------------------------SETEKSSDIAQVKIKDVSYTLLVLKVNVAVKNTGKDPLNVD-SDFTLYQGD-TK-SD-TD-----PEDYKQGSTINADKSVEGNLFFV---VDKGKQYELNYTPESGDKSVTFKIDGKKILATA- | |||||||||||||
7 | 1xksA | 0.12 | 0.09 | 0.79 | 0.53 | MRFsearch | -------SFILSSSSQLIRLIPESGKIHQHILPSDLTLSSVLWDR----ERSSFYSLTS-SNISKWELDD--SSEKHAYSWDI-------------------------NRALKENITDAIWGSES----NYEAIKEGVNIRYLDLKQNCDGLVILAAAWHSADNPCLIYYSLITIEDN---GCQMSDAVTVE-VTQYNLCQLTVPNFSNQTAYLYNE-----SAVYVCSTGTGLPQEKIVFNAQGDSVLGA-- | |||||||||||||
8 | 4r4gA1 | 0.13 | 0.06 | 0.45 | 0.62 | FFAS-3D | --------------------------------------------------------------------------------------------------------------------------------SETEKSSDIAQVKIKDVSYTLPVLKVNVAVKNTGKDPLNVDDFTLYQGDTKSDTDPEDYSEKL-------QGSTINADKSVEGNLF---FVVDKGKQYELNYTPESYGKSVTFKIDKKILATAD- | |||||||||||||
9 | 4es8A | 0.14 | 0.12 | 0.83 | 0.79 | SPARKS-K | REHNEVKDS---------YIKIDKQSIAARYKTTAPYSVAFKVNTKSLIKDHDYKITFESGITVDYRIGSANKTTDDSFKI---------SDESKYASNVKIEG-------------------EEQGFKQREQGDKTISFRTL-----KEGLVLLSKVEKKPQGDLDVEFKNLKIIDVTNYVGNKNVQLTLKSISLFNSTVTVTKDQQNPISITLSAKSLKNKEKLKVSIKQKQSKKTFFFEVGIDPKVEAK- | |||||||||||||
10 | 5a6dA | 0.06 | 0.05 | 0.79 | 1.00 | CNFpred | FKITE-EGVSMRAMVVLIDLNLPFSKYEVEE----PETIGINMD-KRGKSKDTLILRKGDENFLEITFEGT---AKRTFRLPLIDVEELELELPELPFTAKVVL----LGEVLKEAIKDASLV----------------SDSLKFIAKEDEFTMKAEGEVEIKLTLEEGLLDLEVEE--------ETRSAYGISYLADMVKGIGKADEVTLRFGT-------EMPLQMDYFIR-DEGKLTFLLA--------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |