Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | VHVDKIYRTRENRAWCKERGIRISGPPLGRPPKNVSQEQKKQAADDERIRNCIEGKFGQGKRRFSLGRVMAKLPHTSLTSIAITFLVMNL |
1 | 3gb6A | 0.04 | 0.03 | 0.93 | 1.00 | DEthreader | | VGAFNVNQIQGIMKAVVQLKSPVILQCSRGHGDTIANTAELLAVVMH--GS--S-SVPKDVKD-MINYARVFYLGPGRDAITEMLIPKIK |
2 | 4qjiA | 0.11 | 0.10 | 0.89 | 1.00 | DEthreader | | ALVTAGQGY-AVARVLAQRGADVTLIA-GNHIG---Q--RD-AVSHAPLMLVIVCDLL-LLSGTES-ALEHGSKTLMATRIVDSIAAFLK |
3 | 1rd5A | 0.14 | 0.12 | 0.89 | 0.67 | DisCoVER | | IPYITAGDTAEALRLLDGCGAVIELGVPLSYYKPIEHVKQIAQWGADGVI--IGSAMVRQ-----L--GEAASPKQGLRRLEEYARGMK- |
4 | 3ondA2 | 0.10 | 0.09 | 0.93 | 1.00 | DEthreader | | AKITGSLMTAVLIETLTALGAEVRWCCTDIVSIEGLKTDPKRYHKMKDRV-VGVFPA--IN---VNDSVTKSVMSCSFTNQVIAQLELWN |
5 | 2dfaA | 0.10 | 0.10 | 1.00 | 0.51 | CEthreader | | ANLACGFHGLEAVRLAKAHGVAVGAHPGFPDLVGVYADVLYQIGALSAFLKAEGLPLHHVKPHGALYLKACRDRETARAIALAVKAFDPG |
6 | 3k92A2 | 0.04 | 0.04 | 1.00 | 0.57 | EigenThreader | | ARIIFGNAGSFLAKFMHDAGAKVIGISDANFGMVTDVITNEELLEKDNIQASIVVELASAGGVTVSYFEWVQNNQGVAEKLRSVMVSSFE |
7 | 1c0mC | 0.15 | 0.12 | 0.81 | 0.38 | HHpred | | IKTDNCFTSKSTREWLARWGIAHTTGIPGNSQGQ----------------AMVERANRLLKDRIRVLA-EGDGFMKQGELLAKAMYALNH |
8 | 3ecpA | 0.20 | 0.12 | 0.61 | 0.60 | MRFsearch | | -----------------------------------SLAQALRVIDIYTHRWRIEEFHKAWKTGAGAERQRMEEPDNLERMVSILSFVAVR |
9 | 3jcaA2 | 0.17 | 0.13 | 0.80 | 0.55 | FFAS-3D | | IKTDNAYVSRSIQEFLARWKISHVTGIPYNP----------------QGQAIVERTHQNIKAQLN-KLQKAGKYYTPHHLLAHALFVLN- |
10 | 2h7oA2 | 0.09 | 0.08 | 0.90 | 0.63 | SPARKS-K | | ----WADVARQSLQRFDSTR-----PVVKFGEQYTAIHRQMMAAHAAITLQEVSEFTDDMRNFTSIPLLIQLGREKLRELTTIAERLNRL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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