Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | GGQNVHVAALARGLARRGHRVEVFTRREDEGSPERVELAPGATVVHVPAGPPTPLPKDELLPYMEEFGRWVRDEWQRTEAPDVVHAHFWMSGLAALAAGRACDVPVVQTFHALGTVKRRFQGADDTSPPDRLRLERDLAQHVDRIIATCTDEVAELRAMGVSPDRVRVIPCG |
1 | 6kihA | 0.28 | 0.27 | 0.97 | 1.50 | DEthreader | | GGQNIYVRQLGEALAAAGWHVDMFTRKTDPNDPDVIEHSPHCRTIRLQGLTYIPRE--KLFETLPKFVEAFKAYHAKY-GYPLIHTNYWLSGWVGWQLRQQFNFQWLHTYHSLGVVKYQVEQAQ-RD-ETRLMVEKAILENADCVIVTSPQEEAYLRRVSKAG-QTRLIPCG |
2 | 6kihA | 0.25 | 0.24 | 0.97 | 1.33 | DEthreader | | AGQNIYVRQLGEALAAAGWHVDMFTRKTDPNDPDVIEHSPHCRTIRLQAPTYIPRE--KLFETLPKFVEAFKAYHA-KYGYPLIHTNYWLSGWVGWQLRQQFNFQWLHTYHSLGVVKYQVEQAQ-R-DETRLMVEKAILENADCVIVTSPQEEAYLRRVSKAGQTRLIPCGT |
3 | 6kihA | 0.29 | 0.28 | 0.99 | 6.22 | HHpred | | GGQNIYVRQLGEALAAAGWHVDMFTRKTDPNDPDVIEHSPHCRTIRLQAGPLTYIPREKLFETLPKFVEAFKAYH-AKYGYPLIHTNYWLSGWVGWQLRQQFNFQWLHTYHSLGVVKYQVASEQAQRDETRLMVEKAILENADCVIVTSPQEEAYLRWVS-KAGQTRLIPCG |
4 | 3c4qA1 | 0.27 | 0.26 | 0.95 | 0.43 | MRFsearch | | GGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRREKTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVD-------TPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHDADPDRISVVSP- |
5 | 6kihA1 | 0.27 | 0.27 | 0.98 | 1.40 | SPARKS-K | | GGQNIYVRQLGEALAAAGWHVDMFTRKTDPNDPDVIEHSPHCRTIRLQAGPLTYIPREKLFETLPKFVEAFKAYHAKYG-YPLIHTNYWLSGWVGWQLRQQFNFQWLHTYHSLGVVKYQVASEQAQRDETRLMVEKAILENADCVIVTSPQEEAYLRRWVSKAGQTRLI--- |
6 | 4rbnA | 0.17 | 0.17 | 0.98 | 0.71 | MAPalign | | --QVVYILDQVRALEKVEPKILIVTRLITTCNQRLEKVCTNTWILRVPFRIPHWISRFEIWPHLEIFAGDVEREALAELHPDLIIGNYSDGNLVATLLSRRLGVTQCNIAHALEKTKSDIYWQENYHFSCQYTADLLAMNSADFIVTSTYQEIGQYESYGIDLPKFNIVSP- |
7 | 3c4qA | 0.28 | 0.27 | 0.96 | 0.62 | CEthreader | | GGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRRKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVDTPE-------SEARRICEQQLVDNADVLAVNTQEEMQDLMHHDADPDRISVVSPG |
8 | 3c4qA1 | 0.28 | 0.26 | 0.95 | 1.49 | MUSTER | | GGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRREVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAA-------VDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHH-ADPDRISVVSP- |
9 | 3c4qA1 | 0.27 | 0.26 | 0.95 | 1.53 | HHsearch | | GGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRK-VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVDTP-------ESEARRICEQQLVDNADVLAVNTQEEMQDLHHYDADPDRISVVSP- |
10 | 6kihA1 | 0.27 | 0.27 | 0.98 | 2.02 | FFAS-3D | | GGQNIYVRQLGEALAAAGWHVDMFTRKTDPNDPDVIEHSPHCRTIRLQAGPLTYIPREKLFETLPKFVEAFKAYHAKY-GYPLIHTNYWLSGWVGWQLRQQFNFQWLHTYHSLGVVKYQVASEQAQRDETRLMVEKAILENADCVIVTSPQEEAYLRRWVSKAGQTRLI--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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