>PF13569 (186 residues) GKQLKSVPAKLKKDEYIVAITEAKKQMAEQARRTRAMLEDAMESQETYTYAEIQGMLENP VIHDLVAALVFRVMDGGGVSDHTQEEQVVFGFVTAKGMDIIGSHHIEPSGDTLLTVAHPF QMYKQGMWHTIQKYVFDNQIIQPFKQVFRELYVKTEEELNMEHSLRYAGNQIQPRKTVAC LRTRHW |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | GKQLKSVPAKLKKDEYIVAITEAKKQMAEQARRTRAMLEDAMESQETYTYAEIQGMLENPVIHDLVAALVFRVMDGGGVSDHTQEEQVVFGFVTAKGMDIIGSHHIEPSGDTLLTVAHPFQMYKQGMWHTIQKYVFDNQIIQPFKQVFRELYVKTEEELNMEHSLRYAGNQIQPRKTVACLRTRHW | |||||||||||||||||||
1 | 3okgA2 | 0.04 | 0.03 | 0.63 | 0.58 | DisCoVER | RAAQTELMPHPG----------------RWV---R--LGEVC--DIIMGQSPPSSTYNFEGNGLPFFVARPGDVLISV-RAPVGSTNVANLACC-------------IGRGLAALRPSLERFWLSKA--------------LQNVFIPLPPLQR-----------VAYLQIQQVLKRAQ------- | |||||||||||||
2 | 5fauA | 0.08 | 0.06 | 0.81 | 0.83 | DEthreader | TFVNMLATRVDHARDYCLPQKSLYQWT-ST--GY--TQ--------PICILPVQIWITTGVVW-SG--LATDSAILALDFD-LADCAPKAIALVHFT-------------ASANRLSDSTQGADYKGPTAIIKSVSKMANDGMVHNFMQFNYLDNELLLDALVV-----RVAGYSAF-FVELCKDD | |||||||||||||
3 | 5jqkA | 0.05 | 0.05 | 1.00 | 0.54 | CEthreader | QNSPVVKMKAVKNDVEIDNMKQAHILDGLALLQFFHWCEQKRKTKELFLRHKVDYFRSTKKNFIFPSFSTISASGPNAAVNATIKPAIYLLDSGGQYLHGTTDVTRTTHFGEPTAEEKRIYTLVLKGHLRLRKVIFASYTNSSALDFIARENLFNNFMDYNHGTGHGVGLTLNVHEGGCSIGPVGG | |||||||||||||
4 | 1w9zA | 0.12 | 0.08 | 0.65 | 0.60 | EigenThreader | -----ALPSNVKLSKGEVEKIAKEMFDEITREHTFAAWLFLMNLMILAAAGVL----ANPY------SGSGLFITYEHNLISNGKVCVLFITSLVTTSASSGSLPLTTIPTPLSAYTK--------QVEEVG----------VINTLYALSYLP-------------------------------- | |||||||||||||
5 | 2iazB | 0.10 | 0.03 | 0.34 | 0.21 | HHpred | -----ELSRGLRGLPEYKAVKAAKDAIATDYLAFQEEIQKLAQTGQ-PDASGFGKQIGNSLLSEFFTKQ--------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 3k0lB | 0.12 | 0.08 | 0.60 | 0.48 | MRFsearch | -----------EEEPRLSYIARVDRIISKYLTEHLSALLSVLAAKPNLSNAKLAERSANKILQDLLANWIEKAPD----------------------------------RRILVTVTPSGLDKLNQCNQVVQQLEAQLQG----------------------------VDINLAFLIRNNLELVK- | |||||||||||||
7 | 3c8cA | 0.16 | 0.16 | 0.95 | 0.45 | FFAS-3D | --SLRSV-----SDSVDEIVDGVSKTTAEVINGRKSIAQYATSLIENNEPDNVRTIISQPLIKNTFLLVGFGLEKDGSNINNDPSWNPGPTWDNAGKLVITAPYADSASGEILVSVATPVKDSATGQLAELAELVNEVKLFDAGEFNGKPSEFLGESKINVDTHQIINGKVIDEEIAYAALDE--- | |||||||||||||
8 | 1l7nB | 0.11 | 0.10 | 0.91 | 0.69 | SPARKS-K | KLILFDFDSTLVNNETIDEIAREEEEVKKITKEFEQSLRKRVSLLKDLPIEKVEKAIKRITIKELKNVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEV---------LKENAKGEILEKIAKIEGINLSFKKAGLKIFCAKPILKEK------ADICIEKRDLREILKYIK- | |||||||||||||
9 | 4v37A | 0.04 | 0.03 | 0.72 | 0.56 | CNFpred | ----------------GAHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDASCFEYFAGQAEALDGKQKAPVTLPMERFKSHVLRQP---------------LGVVGLISPWNYP--LLMATWKIAP-------ALAAGCTAVLKPSE------------LASVTCLEFGEVCNEVGL | |||||||||||||
10 | 4rg6A | 0.06 | 0.05 | 0.81 | 0.83 | DEthreader | KDDQTFKFTLQ-KAAAEGLMSLLREMGYLVCQIGRAYFESYTTWHLQALSVLSKDLTD----SP-EA-CAAGNCFSL--Q--R-EHDIAIFQAIQVDP-Y---------------TLLGHEFVLELKALACFRNAI--RVNPRHYNAWYGMYYKQEKFTLNKAIDCKLIVPESVYFLGFS--M--- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |