Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | GKQLKSVPAKLKKDEYIVAITEAKKQMAEQARRTRAMLEDAMESQETYTYAEIQGMLENPVIHDLVAALVFRVMDGGGVSDHTQEEQVVFGFVTAKGMDIIGSHHIEPSGDTLLTVAHPFQMYKQGMWHTIQKYVFDNQIIQPFKQVFRELYVKTEEELNMEHSLRYAGNQIQPRKTVACLRTRHW |
1 | 3okgA2 | 0.04 | 0.03 | 0.63 | 0.58 | DisCoVER | | RAAQTELMPHPG----------------RWV---R--LGEVC--DIIMGQSPPSSTYNFEGNGLPFFVARPGDVLISV-RAPVGSTNVANLACC-------------IGRGLAALRPSLERFWLSKA--------------LQNVFIPLPPLQR-----------VAYLQIQQVLKRAQ------- |
2 | 5fauA | 0.08 | 0.06 | 0.81 | 0.83 | DEthreader | | TFVNMLATRVDHARDYCLPQKSLYQWT-ST--GY--TQ--------PICILPVQIWITTGVVW-SG--LATDSAILALDFD-LADCAPKAIALVHFT-------------ASANRLSDSTQGADYKGPTAIIKSVSKMANDGMVHNFMQFNYLDNELLLDALVV-----RVAGYSAF-FVELCKDD |
3 | 5jqkA | 0.05 | 0.05 | 1.00 | 0.54 | CEthreader | | QNSPVVKMKAVKNDVEIDNMKQAHILDGLALLQFFHWCEQKRKTKELFLRHKVDYFRSTKKNFIFPSFSTISASGPNAAVNATIKPAIYLLDSGGQYLHGTTDVTRTTHFGEPTAEEKRIYTLVLKGHLRLRKVIFASYTNSSALDFIARENLFNNFMDYNHGTGHGVGLTLNVHEGGCSIGPVGG |
4 | 1w9zA | 0.12 | 0.08 | 0.65 | 0.60 | EigenThreader | | -----ALPSNVKLSKGEVEKIAKEMFDEITREHTFAAWLFLMNLMILAAAGVL----ANPY------SGSGLFITYEHNLISNGKVCVLFITSLVTTSASSGSLPLTTIPTPLSAYTK--------QVEEVG----------VINTLYALSYLP-------------------------------- |
5 | 2iazB | 0.10 | 0.03 | 0.34 | 0.21 | HHpred | | -----ELSRGLRGLPEYKAVKAAKDAIATDYLAFQEEIQKLAQTGQ-PDASGFGKQIGNSLLSEFFTKQ--------------------------------------------------------------------------------------------------------------------- |
6 | 3k0lB | 0.12 | 0.08 | 0.60 | 0.48 | MRFsearch | | -----------EEEPRLSYIARVDRIISKYLTEHLSALLSVLAAKPNLSNAKLAERSANKILQDLLANWIEKAPD----------------------------------RRILVTVTPSGLDKLNQCNQVVQQLEAQLQG----------------------------VDINLAFLIRNNLELVK- |
7 | 3c8cA | 0.16 | 0.16 | 0.95 | 0.45 | FFAS-3D | | --SLRSV-----SDSVDEIVDGVSKTTAEVINGRKSIAQYATSLIENNEPDNVRTIISQPLIKNTFLLVGFGLEKDGSNINNDPSWNPGPTWDNAGKLVITAPYADSASGEILVSVATPVKDSATGQLAELAELVNEVKLFDAGEFNGKPSEFLGESKINVDTHQIINGKVIDEEIAYAALDE--- |
8 | 1l7nB | 0.11 | 0.10 | 0.91 | 0.69 | SPARKS-K | | KLILFDFDSTLVNNETIDEIAREEEEVKKITKEFEQSLRKRVSLLKDLPIEKVEKAIKRITIKELKNVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEV---------LKENAKGEILEKIAKIEGINLSFKKAGLKIFCAKPILKEK------ADICIEKRDLREILKYIK- |
9 | 4v37A | 0.04 | 0.03 | 0.72 | 0.56 | CNFpred | | ----------------GAHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDASCFEYFAGQAEALDGKQKAPVTLPMERFKSHVLRQP---------------LGVVGLISPWNYP--LLMATWKIAP-------ALAAGCTAVLKPSE------------LASVTCLEFGEVCNEVGL |
10 | 4rg6A | 0.06 | 0.05 | 0.81 | 0.83 | DEthreader | | KDDQTFKFTLQ-KAAAEGLMSLLREMGYLVCQIGRAYFESYTTWHLQALSVLSKDLTD----SP-EA-CAAGNCFSL--Q--R-EHDIAIFQAIQVDP-Y---------------TLLGHEFVLELKALACFRNAI--RVNPRHYNAWYGMYYKQEKFTLNKAIDCKLIVPESVYFLGFS--M--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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