>PF13502 (244 residues) FGRIDSDITISGNTLTLTNGLIDTGFSRLTADGEWVNNPGNERTSLKGKLRGQKIDAAAE FFGVTTPIRQSSFNVDYDLHWRKAPWQPDEATLNGIIHTQLGKGEITEINTGHAGQLLRL LSVDALMRKLRFDFRDTFGEGFYFDSIRSTAWIKDGVMHTDDTLVDGLEADIAMKGSVNL VRRDLNMEAVVAPEISATVGVAAAFAVNPIVGAAVFAASKVLGPLWSKVSILRYHISGPL DDPQ |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | FGRIDSDITISGNTLTLTNGLIDTGFSRLTADGEWVNNPGNERTSLKGKLRGQKIDAAAEFFGVTTPIRQSSFNVDYDLHWRKAPWQPDEATLNGIIHTQLGKGEITEINTGHAGQLLRLLSVDALMRKLRFDFRDTFGEGFYFDSIRSTAWIKDGVMHTDDTLVDGLEADIAMKGSVNLVRRDLNMEAVVAPEISATVGVAAAFAVNPIVGAAVFAASKVLGPLWSKVSILRYHISGPLDDPQ | |||||||||||||||||||
1 | 3fhhA | 0.06 | 0.05 | 0.75 | 1.02 | EigenThreader | DLLQRVFGTGGTHSLGLGASAFGRNLDGIVAWSSRDRGTAPNDESINNMLAKIDS----------AQSLSGLVRYYNNDAREPQTVEANPMVDRSTIQRDAQL--SYKLAPQG------------------NDW----LNADAKIYWSEVRINAQEYREQITKGALFADSGEYYRQEQGSFPQAKIDFSSGWRDLP--------------------------ITLLGGTRYDSYRGSSDGYKDV | |||||||||||||
2 | 3lycA | 0.13 | 0.09 | 0.68 | 1.35 | CNFpred | PTEFMVTANSR----NLKKLAAAG-STHVNINSPLQA----EEFEAGLAG-------------------SGIIQFHDTASFTN-----LKIEIAGSGDFVGHKVYCEELNGDMAGSNTIV---------------------LGGTVGIAEFSIASGTVRAFDCTMDELECKIAGSGDIEAF---VVNKIKAEIAGSGSVKYKGDP----------------------QDIQKKVMGSGKIEKVE | |||||||||||||
3 | 3qq2A | 0.08 | 0.06 | 0.79 | 0.75 | DisCoVER | PWARTFSERQQAYDQTVSGLEIGLGGLLGYTYADRTYP-GDGGGKVKGLHVGGYAA-YVG--DGGYYLDTVLRLGRYDQQYNIAGTDGGRVTADYRTSGAAWSLEGGRRFE--LPN-DWF-----------------AEPQAEVMLWRTSGKRVTLGRLGLRFGRRIIVQPYARLGWTQEFKSGRVELGAGVDAALG---------------------------KGHNLYASYEYAAINIPWS- | |||||||||||||
4 | 6v81A | 0.07 | 0.05 | 0.73 | 0.83 | DEthreader | TPRISSVQQTQDGVDYTVSTTRFTAQKNLANAKLGVRIDESKLSLIFNSVDIKADDP-GG-----RADTRKTIKQTQAGLRYERS----MSVMMYAGERET-TQYQSIPMAPQLNP-SH-----------------A---GGVI-TLQRHYQGIDNYENMS-ENRKGYRRDERNLMWNIDPYRSSVWFDSNDHYVTPGN--------------------------G---DDSGDASYFET---- | |||||||||||||
5 | 4zgvA | 0.05 | 0.05 | 0.98 | 0.92 | CEthreader | NRQQSDIPYYHEYLQQWDDQERINETYLLKGTYLTD-----SGDIIRMTGMYSPHESKFYKKDVKNGGFTNSGGGYRFNMEWEHNASWGKMTSLAGYQYTEDKTEHEADSYQTWRRFSSGFVSNVIDWSSSGGANGQNSNIGGYGSFATNTSSFSLKQDYELNPVSWYGINHQIDFGWETDFYTSRYRRSDVYTGGVLVVPTGASAGSVVCQSGDELCIPGEQYSRTRILYPERNVQVSNVNYA | |||||||||||||
6 | 4ft6A | 0.06 | 0.04 | 0.67 | 1.00 | EigenThreader | IAGLTLHGSLSQRFDYLGAEYRFNAERSQVGLWQARLQ--DIYRQDYYSLSHKG--------------WRLGASVGLFDTRDEGAAKLGELENRALTGFFSATG---------------------------------------HSLGAGYQRMYGDGERSWQLRYDFVALARYASGAHARMDDGRAWERDVDVQSGPLK--------------------------NLGLRWRNAMLRSNHAADV | |||||||||||||
7 | 5vtgA | 0.17 | 0.09 | 0.50 | 0.33 | HHpred | ----------------------------------------------------------------NLFTLDGRVDVPARIVVHD--------PINSNLIVHVGNNVRIDAF--GL-------KAR-----LTGDL-NVVQDKQG-LGLNGQINIPEGRFHAYGLIVR--KGELLFSG--PPDQPYLNIEAIRNPD--AT----------------------------EDDVIAGVRVTGLADEPK | |||||||||||||
8 | 5vtgA | 0.07 | 0.04 | 0.50 | 0.50 | MRFsearch | -------LFTLDGRVDVPWARIVVH-DPINSNLIVHVG---NNVRIDAF------------------GLKARLTGDLNVVQDK-------QGLGLNGQINIPEGRFHAYG-------------------------------QDLIVRKGELLFSGPYLNIEAIRNPDVIAGVRVTGLAD----EPKAEIFSDP--------------------------------------------------- | |||||||||||||
9 | 5vtgA | 0.18 | 0.09 | 0.51 | 0.57 | FFAS-3D | ------------NLFTLD--------GRVDVPWARIVVHDPINSNLIVHVGN-----------------------NVRIDAFG-----LKARLTGDLNVVQDKQGLG---------------------------------------LNGQINIPEGRFHAYGQDLIVRKGELLFSG--PPDQPYLNIEAIRNPDATED------------------------------DVIAGVRVTGLADEPK | |||||||||||||
10 | 6beaA3 | 0.06 | 0.04 | 0.65 | 0.69 | SPARKS-K | DGDATDNITLADS---------NIINGGIETIVTAG--NKTGIHTVNLNIKD----------GSVIGAANNKQTIYASASAQGA------GSATQNLNLSVADST-------------------------------------IYSDVLALSESENSASTTTNVNMNVARSYWEGNAYTFNSGDKAGSDLDINLSDSSVWKGKVSGAGDASVSLQNGSVWNVT---------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |