>PF13497 (263 residues) TKNKYTVETLKPLNILYDHEHWLTQQDVDMANGYVELIERTRSEKTPQIGDRLIYVDRYG KYYSNALIENNDEESGRISICEEPYIPFVWEQDANIRLSVSGGAFHHIDPKQLKFVRWTE GAFKDWGNCGACANGAVTFTAKVPLWSYSEPDPLYGDFTTETWRQYYLTKDTGPDARNLY QGYDMAFRTEEDFRQFLKDYEGTVFKGNWENQIVLWCFRHENRFLPQHEWDKIDAPAMER RLNFHPEQVKLVKDMDSHITYCY |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | TKNKYTVETLKPLNILYDHEHWLTQQDVDMANGYVELIERTRSEKTPQIGDRLIYVDRYGKYYSNALIENNDEESGRISICEEPYIPFVWEQDANIRLSVSGGAFHHIDPKQLKFVRWTEGAFKDWGNCGACANGAVTFTAKVPLWSYSEPDPLYGDFTTETWRQYYLTKDTGPDARNLYQGYDMAFRTEEDFRQFLKDYEGTVFKGNWENQIVLWCFRHENRFLPQHEWDKIDAPAMERRLNFHPEQVKLVKDMDSHITYCY | |||||||||||||||||||
1 | 1sddA | 0.06 | 0.04 | 0.75 | 0.81 | DisCoVER | KLRQFYV--A--AQ--SIKKIVYRE--YEAYFQKE-KPQSRT---SGLLGPTLYAEVG----------------DIMKVHFKNKALSIHAQGIKYSSEGVAPGYTYEWIISSGPPCLTH-I-Y--YSYVNLVEDFNS--GLIGPLLICKKG-TLTEDGQQH-VLMFAVFDESSWNQTSLMYTVNGYV-------------N-GTM--------P-DIHLIGMSLF----S--I-HFNTLVSATSTTRWTIASLIPRHFMQAY- | |||||||||||||
2 | 3pflA | 0.07 | 0.05 | 0.76 | 0.67 | DEthreader | -------E-LNEKLATAWEGFKWQNE-VNVR-FI-------------------V-PDFDHGYEKIVGLQTALIPFG--GDYRRVALYGILKLEIQALMKAYDISFGAASQNGAAMSF--TSTLDVY--------------VLVMLMVRFLRTYDLFSGDPWATESIGGMGLD----GRTLVTKNSFLWSEKLPLFKKAASQYENDMRFNNDDYAIACC-ITPHGDGAVASLTVALPFYAKDG------ISYTF----NRVSGY | |||||||||||||
3 | 2vmnA | 0.09 | 0.09 | 0.97 | 0.43 | CEthreader | GRRYYGGCEYVDIVEELARERAKQLFGAEHANVQGAQANMAVYFTVLEHGDTVLGMNLSHGGHYNFVAYGVDPETHVIDYLHRPKLIVAAASAYPRIIDFVGAYLMVDMAHIANPVPYAHFVTTTTHKTLRGPRGGMILCQEQFAKQIDKAIFPGIQGGPLMHVIAAKAVFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDLR-------PQQLTGKTAEKVLDEVGITVNKATIPYDPESPFVTSG | |||||||||||||
4 | 3qd1X | 0.06 | 0.05 | 0.76 | 0.75 | EigenThreader | --------------------------------------------RAVKGDMITSFDDTSRLLTWTI---NLTPRQVKSNLGALVSGNVTIN---GKNAVYNAWNLGESVNDTGGEVKLGLRLVTSDKKIQVAATTNGSWDKAGYNTTIVEKDTERPVPSGESFEYFATVTDNSNAFDLLKVRIFGNVPID---------TTRYVVATDAGNVNGQFKLIIRFFVNNPKKSNPDLRAQGITVSNNGTTTITYR----DGRKDII | |||||||||||||
5 | 2vpsA | 0.14 | 0.10 | 0.69 | 0.39 | HHpred | --------------RRWLVRKGLLLPDVNWACHIFQLVRRNGTTTKPEADALLVYPST--DANPVGTITEVG--DDYVCVADQNYRFHKWESSCALKLDHRDGIWTIIDDEIEIPLGWLTFPGRANRPEG---AP---------------PVALPSHFKEPKPLRRNFL--PTESK------ANWLDMNNPAERLFVEEFG-----------------VVSYYESNHEFHLRCVAYGTQHAIF-------------------- | |||||||||||||
6 | 1w5dA2 | 0.13 | 0.07 | 0.56 | 0.55 | MRFsearch | ------------------------TLLPSDFDKMAEILKHSG--VKVIKGNLIGDDTWNEDYDAGTVIVEVTPNQEEPAVSVSPKTDYITIKN-DAKTTAA--------GSEKDLTIEREHG-----------TNTITIEGSVPVD--------------ANKTKEWISVW------------EPAGYALDLFKQSLKKQKGDIKTGEASSSDVLLSHRS------------------------------------------- | |||||||||||||
7 | 2qx2A | 0.12 | 0.12 | 0.95 | 0.40 | FFAS-3D | NANSYNGGDFEDGKYLYQDGQFLDKKTINEIDKSEKDKKDKKANENPSHEGETNPAEKSPAYLSNILEQDFYGKNIKGTIGLANSVYYYKKEKDGPTFS------KKLDDSEVKKQGKQSEILSRLRENDDLKDIPIH----FAIYKQSSEDSITGEF----ITQATAEKSQTKLEWHNINEKSALLPSSTNFKQFNDNLQQAVGKVKVDKKPQRLVVDLPIDYYGQAETIGIIDNYEIRIKDGNQPRALISKTDKEPQVHIY | |||||||||||||
8 | 1h2xA | 0.09 | 0.08 | 0.93 | 0.65 | SPARKS-K | EQTKAFVEAQNKITVPFLEQC----PIRGLYKERMTELYDYPKYSCHFKKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLTVALRGYAFSEDGEYFAYGLSGSDWVTIKFMKVDGAKELPDVLERVKFSCMAHDGKGMFYNAYP----QQDGKSDGTETSTLHQKLYYHVLGTDQSEDI-----LCAEFPD------EPKWMGGAELSDDGRYVLLSIREGCWYCDLQQENGITGILKWVKLIDNFEGEYDYVTNEGTVFTFK | |||||||||||||
9 | 4r04A | 0.10 | 0.05 | 0.50 | 0.82 | CNFpred | -------------------------YLISNLSNTIEKINTLG-----LDSKNIAYNYTDE---NNKYFGAISKTSQKSIIHYKKKNILEFYNDSTLEFNSK---------------DFIAEDINVFMKD-----DINTITGKYYVDNNT-----------DKSIDFSISLVS----KNQVKVNGLYL-NESVYSSYLDFVK-------------------------------------------------------------- | |||||||||||||
10 | 3prxB | 0.03 | 0.02 | 0.73 | 0.67 | DEthreader | -----------KPGDITPDIPTCM--GT--LV-VK--GD-NLIQMPGMVAVDKAV--------LN----------SRSDFPKSW-LWLTKDLKTMSFYL--------R-D--S-I-T-T-WVVLAVSFTPKGI-CVAEPYEIRVMKIDLQMPSVVEAFCSASTYFTGFLPDAEDNMKILKHFEVG-I--G--YHPDKGTGLLN-------------AGETCSSLNHVYKTVVGPTHQYISQRKQEALLIWGSRSLLPISYIIT | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |