Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | AQRVVIYGPEGIGKSSFAAQFPEPLFIDTEGSTDNMDVARLDKPTSWTMLRNQIAWVKSNPTCCKTLVIDTIDWAESLIVADVCAQHGKKGIEDFGYGNGYTYAREEMGRFLNLLQELIELGINVVLTAHAQMRKFEQPDEMGAYDRWELKLGKKTSSQTAPVVKEWADMVLFANYKTIVVNSDSNKKKAQGGKRVLYTQHHPAWDAKNRH |
1 | 4a01A | 0.06 | 0.06 | 0.91 | 1.00 | DEthreader | | ---------TEYYVGIFMVAFAILIFLF----LG-SVEGFSTQKPALATAIFSTVSFLLGG--VTSLVSGFLGMKIATYANARTTLEARKVKAF--AFRSGAVMGFLLAANGLLVLYIAINFITYLGSALRVGITKAAADVDNVDNVGDIGMAAIGKGFAIGSAALVSLFFLPWFMTKSSALKMVEEVIASKEPALVTPVLAGLKAVSLV- |
2 | 3wmeA | 0.18 | 0.16 | 0.85 | 3.34 | HHpred | | GKTVAIVGGSGAGKSTIIQLLM-RFYDPQGGLFDGTPAWNYDF----HALRSQIGLVSQEPVLFSGTIRDNILYGKDATDEEVIQALREANAYSFALPDGLDTEVGERGLALSGRIAIARLKHPTLLCLDESTSALDAESE-ALVQEALDRMMAVTSIAHRLSTVARADLILVMQDGVVVEQGNHS------------------------- |
3 | 5x7kA | 0.14 | 0.11 | 0.83 | 0.54 | DisCoVER | | EGGDVLGIIGPSGKSTLARLLVGIWPVSGIVRLDNADIY---QWNKDE-LGPYIGYLPQDIELFAGTIAENIARFNDIDSEKVIEAAKLAGVHEILFPNGYDSVIGNGGGGQKQRIGLARYGDPALVVLDE-PNSNLDDAGEKALNQA------------IMFLKQRNKTVVLITH----------------RTNLLSMT-SKLLLLVNG- |
4 | 5c73C | 0.12 | 0.10 | 0.83 | 0.37 | MRFsearch | | -EKIAFIGESGCGKSTLVDLII-GLLKPKQILIDKQELNAS----NAKNYRQKIGYIPQNIYLFNDSIAKNITFGDAVDEEKLNKVIKQANLEHFIKPQGVQTKVGDGGSNLSGRIAIARALEPEILVLDQATSALDTQSE-AKIMDEIYKISKDKTMIIILSTITQCDKVYRLEHGKLKEEK---------------------------- |
5 | 3g61A | 0.15 | 0.15 | 0.96 | 1.59 | SPARKS-K | | GQTVALVGNSGCGKSTTVQLMQR--LYDPLDGIDGQDIRTI----NVRYLREIIGVVSQEPVLFATTIAENIRYGEDVTMDEIEKAVKEANAYDFILPHQFDTLVGERGAQLSQRIAIARALNPKILLLDEATSALD-TESEAVVQAALDKAREGRTAHRLSTVRN-ADVIAGFDGGVIVEQGNHDELMREKGIYFKLVMTQTLDEDVPPA |
6 | 5x7kA | 0.12 | 0.11 | 0.88 | 0.68 | MAPalign | | GDVLGIIGSASG-KSTLARLLVGIWPVEGIVRLDNADIYQW----NKDELGPYIGYLPQDIELFAGTIAENIARFNDIDSEKVIEAAKLAGVHILRFPNGYDSVIGNGQKQRIGLARALYGDP-ALVVLDE-PNSNLDDAGEKALNQAIMFLKQKTVVLITTNLLSMTSKLLLLVNG-----------------NVNAFGPTQQVLQALA- |
7 | 4pl0A | 0.10 | 0.09 | 0.94 | 0.41 | CEthreader | | GKMYSLTGPSGSGKSTLVKIISGYYKNYFDIYLNDISLRNIS----DEDLNDAIYYLTQDDYIFMDTLRFNLRLANDASENEIFKVLKLANLSVVNEPVSLDTHLINRGNNQKQRISLARLRKPAIIIIDEATSALDYINESEILSSIRTHFPDALIINISINLLECSDCVYVLNEGNIVASGHFRDLMVSNEYISGLASVT--------- |
8 | 3g61A | 0.15 | 0.15 | 0.98 | 1.02 | MUSTER | | GQTVALVGNSGCGKSTTVQLMQR--LYDPLDGMVSIDGQDIRTI-NVRYLREIIGVVSQEPVLFATTIAENIRYGREVTMDEIEKAVKEANAYDFKLPHQFDTLVGERGAQLSGGQKQRIA-NPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVILSTVRN-ADVIAGFDGGVIVEQGNHDELMREKGIYFKLVMTQTLDEDVPPA |
9 | 2yl4A | 0.17 | 0.14 | 0.85 | 1.22 | HHsearch | | GSVTALVGPSGSGKSTVLSLLLR--LYDPASGLDGHDIRQLNP----VWLRSKIGTVSQEPILFSCSIAENIAYGADPSAEEIQRVAEVANAVAFNFPQGFNTVVGEKGVLLSGRIAIARLKNPKILLLDEATSALDAENE-YLVQEALDRLMGRTVIAHRLSTIKNANMVAVLDQGKITEYGKHEE------------------------ |
10 | 4f4cA3 | 0.19 | 0.17 | 0.90 | 1.29 | FFAS-3D | | GQTVALVGSSGCGKSTIISLLLR--YYDVLKGKITIDGVDVRDI-NLEFLRKNVAVVSQEPALFNCTIEENISLGEGITREEMVAACKMANAEKFTLPNGYNTLVGDRGTQLSGGQKQRIVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHRLSTIADLIISCKNGQVVEVGDHRALMAQQG------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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