Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | VWRFERYDNEIKNGAKLIVRQSQVAIFVNEGKIADCFESGTYELETQNLPILSTLKGWKHGFSSPFKAEVYFVNIRNFTDYKWGTKNPVMLRDPEFGPLRIRAFGNYAIRVADPKKFLIDIVGTDGHFTTDEISDQLRNLIVTRFTDCIAESKIPVLDMAANYDELSEYVTNKISPEFEELGIGITKFLIENISLPEAVEKALDKRSSMGI |
1 | 2zuoM2 | 0.08 | 0.07 | 0.80 | 1.00 | DEthreader | | -----KELGVKTRVVSYRVPHNAAVQVYDYRKRARVVFGPELVT------LDP------------EEQFTLCLLLGPDF-FTDVI-T-IETAD----HARLQLQLAYNWHFELAAKLFSVP----------DFVGDACKAIASRVRGAVAS-V-TFDDFHKNSARIIRMAVFGDQAVFPQNGLVVSSVDVQSVEPTRDALQRSVQLAEI-S |
2 | 2zuoM | 0.09 | 0.07 | 0.79 | 1.00 | DEthreader | | ------IYVVRAVIGSYRVPHNAAVQVYDYRKRARVVFGPELVT-------LD------------PEEQFTLCLLLGPDFFTDVI--TIETAD----HARLQLQLAYNWHFELAAKLFSVP----------DFVGDACKAIASRVRGAVA--SVTFDDFHKNSARIIRMAVFGQAV-FPQNGLVVSSVDVQSVEPDQRTRALQRSVLAEI- |
3 | 3bk6A | 0.17 | 0.10 | 0.62 | 1.53 | HHpred | | ----------------------------------------------------------------MIFEKAVIVDLRTQV-LDVPV-QETITKD----NVPVRVNAVVYFRVVDPVKAVTQV---------KNYIMATSQISQTTLRSVIGQA--HLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQKAMARQAEAER |
4 | 3bk6A | 0.18 | 0.09 | 0.52 | 1.55 | DisCoVER | | ------------------------AV---------I------------------------------------V-DLRTQVLDVPV-QETITKD---N-VPVRVNAVVYFRVVDPVKAVTQV---------KNYIMATSQISQTTLRSVIG-Q-AHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELP--------------- |
5 | 1winA | 0.13 | 0.09 | 0.65 | 1.30 | MRFsearch | | ------------------------------------------------------------------GSSGQRISLEIMTLQP--RCEDVETA----EGVALTVTGVAQVKIMTEKELLAVACEQFLGKNVQDIKNVVLQTLEGHLRSILGTL--TVEQIYQDRDQFAKLVREVAAPDVGRMGIEILSFTIKDVYDKVDYLSSLGKTQTSGP |
6 | 1winA | 0.12 | 0.08 | 0.66 | 1.22 | SPARKS-K | | ---------------------------------------------------------------GSSGSSGQRISLEIM-TLQPR---CEDVETAEGV--ALTVTGVAQVKIMTEKELLAVACEQFLGKNVQDIKNVVLQTLEGHLRSILGTL--TVEQIYQDRDQFAKLVREVAAPDVGRMGIEILSFTIKDVYDKVDYLSSLGKTQTSGP |
7 | 2zuoM | 0.09 | 0.07 | 0.80 | 1.71 | MAPalign | | GIYVQDVKTGKVRAVSYRVPHNAAVQVYDYKRAR-VVFGPLVTLDP--------------------EEQFTCLLLGPD-FFTDVI--TIETAD----HARLQLQLAYNWHFELAAKLF-SV---------PDFVGDACKAIASRVRGAVA--SVTFDDFH---KNSARIIRMAVQAVFPQNGLVVSSVDVQSVEPVQRTRDALQRSVQLAI |
8 | 4fvfA | 0.15 | 0.08 | 0.55 | 1.36 | CEthreader | | ------------------------------------------------------------------TDSLIKVDMRTI-SFDIPPQ-EVLTKD----SVTISVDGVVYYRVQNATLAVAN---------ITNADSATRLLAQTTLRNALGTK--NLSQILSDREEIAHHMQSTLDDATDDWGIKVERVEIKDVKLPVQ------------- |
9 | 1winA | 0.13 | 0.09 | 0.66 | 1.08 | MUSTER | | ---------------------------------------------------------------GSSGSSGQRISLEIMT-LQP-RCEDVETAEG----VALTVTGVAQVKIMTEKELLAVACEQFLGKNVQDIKNVVLQTLEGHLRSILGTL--TVEQIYQDRDQFAKLVREVAAPDVGRMGIEILSFTIKDVYDKVDYLSSLGKTQTSGP |
10 | 3bk6A | 0.19 | 0.09 | 0.51 | 1.19 | FFAS-3D | | -------------------------------------------------------------------------------------VQETITKDN----VPVRVNAVVYFRVVDPVKAV---------TQVKNYIMATSQISQTTLRSVIG--QAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQKAMARQAE--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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