Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | LQALDAIAAAVAERLPTERYPLRVIQTLNRYLYEDLGFAGNAADYYDPRNSYLNDVIERRKGIPITLSLVYLEVAQRLDFPMVGVGMPGHFLIRPALAEMEVFVDPFHQGAVLFAEDCQERLSQVYGHPVALRPEFLQPVSKRQFLARML |
1 | 3u84A | 0.08 | 0.07 | 0.93 | 1.17 | DEthreader | | YARFTAQIRGAVDLSLYPRSSRELVKKVSDVIWN-S-LSRSYKDR-AH-IQSLFSFITGTKLDSSGVAFAVVGACQALGLDVHLALSEDHAWVVFGPNGEQTAEVTWEDRRGQTVNAGVAERS--WL--YLKGS--YMRCMEVAFMVCAI |
2 | 3u84A | 0.07 | 0.07 | 0.93 | 1.17 | DEthreader | | YARFTAQIRGAVDLSLYPRSSRELVKKVSDVIWN-S-LSRSYFK-DRAHIQSLFSFITGTKLDSSGVAFAVVGACQALGLDVHLALSEDHAWVV-FGPNEQTAEVTWEDRRGQTVNAGVAERS-WL---YLKG--SYMRCMEVAFMVCAI |
3 | 4xz7A2 | 0.10 | 0.09 | 0.93 | 1.04 | DisCoVER | | DDLIHKLIESS--EAMKQSSERDKVKAFVQYVA--NHTTYDWEAANYYLGSDLFAVTERQKAMCVGFSTTAARAFNMLGLPAYVVVGKPHATARVYYDKKWHTIDGTGFFIGEDS--YDVVEAGQEPKAERN---YMIIDLLLFNKEKS- |
4 | 1l9mB2 | 0.12 | 0.11 | 0.97 | 1.08 | MAPalign | | EEDILSICLSILRSDVASRDPKYVGRVLSAMINDNGVLAGNWTYTGGRDPWGSVEILKPVYGQCWVFAGTLNTALRSLGIPSRVITNNFHVWNEGWFYGGWQVLDATPQCGPASVPFIFAEVNSVNSHTI-G--RYISTKVFQKALGKL- |
5 | 4xz7A2 | 0.11 | 0.11 | 0.99 | 1.26 | HHsearch | | KERFIANDDLIHKLEAMKSSERDKVKAFVQYVANHTTYDWEAANKQNYLGSDLFAVTERQKAMCVGFSTTAARAFNMLGLPAYVVVGVPHATARVYYDKKWHTIDGTGFITKYSEKHFSTIGEDSVEAGEPAERNYMIID--SNYESWAM |
6 | 3u84A | 0.08 | 0.07 | 0.93 | 1.17 | DEthreader | | YARFTAQIRGAVDLSLYPRSSRELVKKVSDVIWN-S-LSRSYFK-DRAHIQSLFSFITGTKLDSSGVAFAVVGACQALGLDVHLALSEDHAWVV-FGPNEQTAEVTWEDRRGQTVNAGVAERS--W---LYLKG-SYMRCMEVAFMVCAI |
7 | 6opjA | 0.09 | 0.08 | 0.94 | 1.17 | DEthreader | | YARFTAQIRGAVDLSLYPRSSRELVKKVSDVIWN-SLSRSYFKDR-A-HIQSLFSFITGTKLDSSGVAFAVVGACQALGLDVHLALSEDHAWVVFGPNGEQTAEVTWHDRRGQTVNAGVAERS--WL--YLK-G-SYMRCMEVAFMVCAI |
8 | 6opjA | 0.08 | 0.07 | 0.93 | 1.17 | DEthreader | | YARFTAQIRGAVDLSLYPRSSRELVKKVSDVIWN-SLSRSY--FKDRAHIQSLFSFITGTKLDSSGVAFAVVGACQALGLDVHLALSEDHAWVV-FGPNEQTAEVTWHDRRGQTVNAGVAERS-WL---YLKG--SYMRCMEVAFMVCAI |
9 | 4xz7A2 | 0.11 | 0.10 | 0.93 | 1.05 | MAPalign | | DDLIHKLIESS--EAMKQSSERDKVKAFVQYVAN-H-TTYDWEAANYYLGSDLFAVTERQKAMCVGFSTTAARAFNMLGLPAYVVVGKPHATARVYYDKKWHTIDGTKYFIGEDS--YDVVEAGQEPKAERN---YMIID-SNYESWAM- |
10 | 3kd4A | 0.05 | 0.05 | 0.89 | 1.08 | HHsearch | | KESGYESKTFAQFLTDKSGNEQEKVNIIRDHILNNLSTCPIP--ATGYTVRDIDTVLRSAYGTPLEIAQLLNV-LNAAGIPSEVLAACQTLAVKATVDGKDQYLSA------SPL-TN----RGGLDKVVSLSG-TSIEIETTP--IQIK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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