>PF13367 (192 residues) EPPWMLATAFFWGALVAIFIAFVMNTISGGIIALLAGDKAGEFFATVISAPFVEETSKAL VLFGLFWWKRDEFDGVIDGIVYAAMVGLGFAMTENIQYYGGAALEGGVAGSLGTFILRGL MAPFSHPLFTSMTGIGLGLASQTNKRGIRILAPLVGLFVAMSLHGLWNLSASLNPVLYFV VYFFIMVPVFIA |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | EPPWMLATAFFWGALVAIFIAFVMNTISGGIIALLAGDKAGEFFATVISAPFVEETSKALVLFGLFWWKRDEFDGVIDGIVYAAMVGLGFAMTENIQYYGGAALEGGVAGSLGTFILRGLMAPFSHPLFTSMTGIGLGLASQTNKRGIRILAPLVGLFVAMSLHGLWNLSASLNPVLYFVVYFFIMVPVFIA | |||||||||||||||||||
1 | 5a63C | 0.13 | 0.12 | 0.92 | 1.17 | DEthreader | -GDPLRVIILVAGAFFWL-VSLLLASVVWFILVVTRDLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADELASRS-ISIRQMAYVSGLSFGIISGVFSVINILADAGVVYFLTSAFLTA-AIILLHTFWGVVFFDACERR-----------R-YWALGLVVGSHLLTSGLTFLSLLPIYAVTVSMGLWAFIS | |||||||||||||
2 | 5a63C | 0.10 | 0.09 | 0.93 | 1.17 | DEthreader | VGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVTRDLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADELAGRS-ISIRQMAYVSGLSFGIISGVFSVINILA-DALVVYFLTSAFLTAAIILLHTFWGVVFFDACERR-----------R-YWALGLVVGSHLLTSGLTFLNYEASLLPIYAVTVSMGLS | |||||||||||||
3 | 5a63C | 0.12 | 0.11 | 0.93 | 0.40 | HHpred | AGDPLRVIILVAGAF-FWLVSLLLASVVWFILVHVTDDQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADSEDGRSPISIRQMAYVSGLSFGIISGVFSVINILADPDSPYYFLTSAFLTAAIILLHTFWGVVFFDAC----ERRR----YW----ALGLVVGSHLLTSGLTFLNPWSLLPIYAVTVSMGLW- | |||||||||||||
4 | 6u0oA | 0.13 | 0.10 | 0.81 | 0.78 | DisCoVER | SGFQWAMTIFVFFDLAPLIAALILPLIILIIGMYSFDSFI-LLLIGHILMAFVVEFGFRYLQNIVE-----TK---MNTFFASIVVGLMYSVFSA--NT---------TYGTEFAAYNFLYTFSFSMILGELIRATKG----------------RTIYIATTFHASMTFLIFLFSEEIKVIAISTAIVAYI- | |||||||||||||
5 | 5a63C | 0.10 | 0.09 | 0.92 | 0.38 | MRFsearch | ---DPLRVIILVAGAFFWLVSLLLASVVWFILVHVTRLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGDGRSPISIRQMAYVSGLSFGIISGVFSVINILADADSPYYFLTSAFLTAAIILLHTFWGVVFFDACERRR------------YWALGLVVGSHLLTSGLTFLYEASLLPIYAVTVSMGLWA | |||||||||||||
6 | 6m2lA | 0.11 | 0.11 | 0.96 | 1.06 | SPARKS-K | LKIPSYRYVIILGCLLSGLQQFTGINVLVSNSNELYKEFLDS--HLITILSVVMTAVNFLMTFPAIYIVEKL--GRKTLLLWGCVGVLVAYLPTAIANEINR----NSNFVKILSIVATFVMIISFAVSYGPVLWIYLHEMFPSEDSAASLASLVNWVCAIIVVFPSDIIIKKSPSILFIVFSVMSILTFFF | |||||||||||||
7 | 5a63C | 0.10 | 0.09 | 0.94 | 0.97 | MAPalign | AGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVTDRQYGLLIFG-AAVSVLLQEVFRFAYYKLLKKAGRSPISIRQMAYVSGLSFGIISGVFSVINILADVV-GIHGDSP-YYFLTSAFLT-AAIILLHTFWGVVFFDACER----RRYWALGLVVGSHLLTSGLT-FLNP-WYEASLLPIYAVTVSMG-- | |||||||||||||
8 | 5a63C | 0.09 | 0.09 | 0.94 | 1.08 | CEthreader | AGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVTDRLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADSEDGRSPISIRQMAYVSGLSFGIISGVFSVINILADADSPYYFLTSAFLTAAIILLHTFWGVVFFDACERRR------------YWALGLVVGSHLLTSGLTFLWYEASLLPIYAVTVSMGLW | |||||||||||||
9 | 5aymA1 | 0.11 | 0.10 | 0.97 | 0.71 | MUSTER | ---LRIETQLLLGRLLTRSGDQAWDFVVPFALLVIFPGKLQVAAFYYLIVKIGTFLLTPSSGKWIDTHPRIQV--VKWGVWLQFFAILAGMVFFGMLDGLVRAGGRESWLLSVLFIALALSGVMASLGSQITDISVGNDLAPSAPERIDLATEVGAPILAGALFPLAGLFLIGLWNLVSFVPEYFLLRNVIQ | |||||||||||||
10 | 5a63C | 0.13 | 0.12 | 0.93 | 1.13 | HHsearch | AGDPLRVIILVAGAF-FWLVSLLLASVVWFILVHVTSDQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEEDGRSPISIRQMAYVSGLSFGIISGVFSVINILADGDSPYFLTSAFL-TAAIILLHTFWGVVFFDACE----RRR---Y-----WALGLVVGSHLLTSGLTFLNPWSLLPIYAVTVSMGLWA | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |