>PF13349 (243 residues) IDSMVIESDSKDVRIIAEERSDISAGISGDSGKLFVTENNRKLELTVKEKEFQFLNGFNR STLIVRLPYDYKGDLAVRTSSGDVSVAGNDHLALSRLNTVSASGNASVTDVRLQDLKVKA SSGDVTISNTVSKTSGIDLASGDANLVHVSGSLDVKMTSGDFNAVLTKITGPVSVTLTSG DANLSLPKNGSFTVKAKSASGDVSSPYSFADKAHKEQHHITGTQGSGRHPIDIKTDSGDL AIR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | IDSMVIESDSKDVRIIAEERSDISAGISGDSGKLFVTENNRKLELTVKEKEFQFLNGFNRSTLIVRLPYDYKGDLAVRTSSGDVSVAGNDHLALSRLNTVSASGNASVTDVRLQDLKVKASSGDVTISNTVSKTSGIDLASGDANLVHVSGSLDVKMTSGDFNAVLTKITGPVSVTLTSGDANLSLPKNGSFTVKAKSASGDVSSPYSFADKAHKEQHHITGTQGSGRHPIDIKTDSGDLAIR | |||||||||||||||||||
1 | 3lycA | 0.10 | 0.09 | 0.88 | 1.17 | DEthreader | EYDCLELEGGGVVNYTQSDAPEGLEIKTDIFEKYEFNVENHKLKIRPKKEFRKH-TNFRPEFVTANS--RN--LKKLAAAGSTHVNINSP-LQAEEFEAGLAGSGIIQFDASFTNLKIEIAGSGDFVGKVYCEELNGD-AGSNTIVLGTVGIAEFSIAGSGTVRAFDCT-DELECKIAGSGDIEAF---VVNKIKAEIAGSGSVKYK---------------GDP--Q-DIQKKVGSGKIEKV | |||||||||||||
2 | 3ljyA | 0.11 | 0.09 | 0.86 | 1.17 | DEthreader | DYNEIKVDGVIDFNYEQS-DDPSTVEVTVDLHYVNIEVKD-RVLTIAFKGAKVD-HFT-KFIVKTNSK--W--LAAAKVSGNANFVNS-P-LTGDETVIKANASLVQLKTVTVGKLDLNVSGSANVVNHLEADKIECDIDGGSITIKGNAKEGDYSIVSGDIHAFGLAVP-QLSCKVTGNGLAEVH---ATDNLKANVVGGNIRYKGPTAVQQ-RIIG------------------KGTVEEV | |||||||||||||
3 | 3lycA | 0.18 | 0.16 | 0.87 | 1.71 | HHpred | YDCLELEG-GGVVNYTQSDAEGLEIKTDRNFEKYEFNVENHKLKIRPKKEFRKHTNFRTEF-VTANSRNL--KKLAAA-GSTHVNINSP--LQAEEFEAGLGSGIIQFDTASFTNLKIEAGSGDFVGHKVYCEELNGDAGSNTIVLGGTVGIAEFSAGSGTVRAFDC--TDELECKAGSGDIEAFVVNKI--KAEI-AGSGSVKYKGDPQ------------------DI-QKKVGSGKIEKV | |||||||||||||
4 | 3lycA | 0.15 | 0.13 | 0.88 | 1.22 | DisCoVER | YDCLELEG-GGVVNYTQSDAPEGLEIKTDRNIKYEFNVENHKLKIRPKKEFRKHTNFRPTEFVTANSRN-L-KKLAAAG-STHVNINSPL-QAEEFEAGLAGSGIIQFDTASFTNLKIEIGSGDFVGHKVYCEELNGDAGSNTIVLGGTVGIAEFSIAGSGTVRAFDCT-DELECKIAGSGDIEAF---VVNKIKAEIAGSGSVKYK----------------G--DPQDIQKKVGSGKIEK- | |||||||||||||
5 | 3lycA | 0.19 | 0.17 | 0.87 | 0.97 | MRFsearch | -DCLELEG-GGVVNYTQSDPEGLEIKTDRNFEKYEFNVENHKLKIRPKKEFRKHTNFRPTEFVTANSRN--LKKLAAAG-STHVNINS--PLQAEEFEAGLASGIIQFHDASFTNLKIEIASGDFVGHKVYCEELNGDAGSNTIVLGGTVGIAEFSIGSGTVRAFDC--TDELECKIGSGDIEAFVV--NKIKAEIA-GSGSVKYKGD-------------------PQDIQKKVGSGKIEKV | |||||||||||||
6 | 3lycA | 0.16 | 0.14 | 0.87 | 1.36 | SPARKS-K | YDCLELEGGG-VVNYTQSDPEGLEIKTDRNFEKYEFNVENHKLKIRPKKEFRKHTNFRPTEFVTANSR---NLKKLAAAGSTHVNINSP--LQAEEFEAGLASGIIQFHDASFTNLKIEIAGSDFVGHKVYCEELNGDAGSNTIVLGGTVGIAEFSIAGSTVRAFDCT--DELECKIASGDIEAFVVN----KIKAEIASGSVKYKGDPDIQKKVGSGKIEKVE------------------- | |||||||||||||
7 | 3lycA | 0.20 | 0.17 | 0.86 | 1.26 | MAPalign | YDCLELEG-GGVVNYTQS-DAPEGLEIDNIFEKYEFNVENHKLKIRPKKEFRKHTNFRPTEFVTANSR---NLKKLAAAGSTHVNINS--PLQAEEFEAGLGSGIIQFHDASFTNLKIEIGSGDFVGHKVYCEELNGDAGSNTIVLGGTVGIAEFSIGSGTVRADC-TD--ELECKIGSGDIEAFV----VNKIKAEIGSGSVKYK---------------GDP----QDIQKKVGSGKIEKV | |||||||||||||
8 | 3jx8A | 0.14 | 0.13 | 0.89 | 1.11 | CEthreader | YDEITFVG-SADFEYEQSDKAPSVTIDENLFDYLVTEVEGGTLKIYPKSIKKGFNNNSYDTVYKIKSNSKELKELNTVG-SGSFIISK--PTKVNREINAGSGNVELRGPVKGYKLECNAGSGNIIAKDIQLDNLSCSLASGEIEVIGTVDRASFNVAGGEIKAFDCQARKAECNIASSGEISVYAT---QILDANIVGSGEIHYK--------------------GDPEISKSIGSGSINKV | |||||||||||||
9 | 3lycA | 0.19 | 0.16 | 0.88 | 1.20 | MUSTER | YDCLELEG-GGVVNYTQSDAPGLEIKTDRNFEKYEFNVENHKLKIRPKKEFRKHTNFRPTEFVTANSRN--LKKLAAAGST-HVNINS--PLQAEEFEAGLASGIIQFHDASFTNLKIEIASGDFVGHKVYCEELNGDAGSNTIVLGGTVGIAEFSIA-GSGTVRAFDCTDELECKIAGGDIEAFVVN----KIKAEAGSGSVKYKGDPQDIQKKVG-------------------SGKIEKV | |||||||||||||
10 | 3lycA | 0.18 | 0.16 | 0.87 | 2.80 | HHsearch | YDCLELEG-GGVVNYTQSDAEGLEIKTDRNFEKYEFNVENHKLKIRPKKEFRKHTNFRTEF-VTANSRNL--KKLAAA-GSTHVNINSP--LQAEEFEAGLGSGIIQFDTASFTNLKIEAGSGDFVGHKVYCEELNGDAGSNTIVLGGTVGIAEFSAGSGTVRAFDC--TDELECKAGSGDIEAFVVNKI--KAEI-AGSGSVKYKGDP------------------QDI-QKKVGSGKIEKV | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |