>PF13337 (456 residues) YFAGKIVRKDLTKMIKEGANVPVYVLEYLLGMYCATTDDEAIATGIDSVKRILAENYVRP DEAEKVKSKVRELGNYTVIDKVTVSLNEKKDVYEAEFSNLGIKGIAVSPNYVKEYEKLLC GGIWCIVKLEYYFDEEIKGASPFNITSLTPIQMPNLDLEEIFNGRKEFTSEEWIDVLLRS VGMEPTQFTDKVKWHLLARMIPLVENNYNVCELGPRGTGKSHIYKEISPNSILVSGGQTT VANLFYNMSSRQIGLVGMWDTVAFDEVAGITFKDKDGIQIMKDFMASGSFARGKEEKQAS ASMVFVGNINQSVEVLLKTSHLFDPFPEAMAYDSAFFDRMHYYIPGWEIPKMRPEFFTNE YGFITDYISEFMREMRKRSFSDSVDKYFKLGNNLNQRDVIAVRKTVSGLMKLLYPNGEFT KDDVETVLRYALEGRRRVKEQLKKIGGMEFYDVHFS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | YFAGKIVRKDLTKMIKEGANVPVYVLEYLLGMYCATTDDEAIATGIDSVKRILAENYVRPDEAEKVKSKVRELGNYTVIDKVTVSLNEKKDVYEAEFSNLGIKGIAVSPNYVKEYEKLLCGGIWCIVKLEYYFDEEIKGASPFNITSLTPIQMPNLDLEEIFNGRKEFTSEEWIDVLLRSVGMEPTQFTDKVKWHLLARMIPLVENNYNVCELGPRGTGKSHIYKEISPNSILVSGGQTTVANLFYNMSSRQIGLVGMWDTVAFDEVAGITFKDKDGIQIMKDFMASGSFARGKEEKQASASMVFVGNINQSVEVLLKTSHLFDPFPEAMAYDSAFFDRMHYYIPGWEIPKMRPEFFTNEYGFITDYISEFMREMRKRSFSDSVDKYFKLGNNLNQRDVIAVRKTVSGLMKLLYPNGEFTKDDVETVLRYALEGRRRVKEQLKKIGGMEFYDVHFS | |||||||||||||||||||
1 | 3ja84 | 0.10 | 0.09 | 0.85 | 1.00 | DEthreader | ------------------------------YKFRKILDERDE-RN-LAY-YH--VGSCKG--MR-ELN-PNDIDKLINLKGLVLRSTPIKQVIKLQETPVQPHSISLCVYDLVDSCR-AGDRI-EVTGTFRSIPIRLKSYKTYVDVVHVKSDKVRQITDQDLAKIREAAREDLYSLLARSIAPSI-YELEDVKKGILLQLFGGTRGDINILLCGPSSSQILQYVHKITPRGVYTSGKGSSAVGLTAYIVLESGALVSDGGVCCIDEFDKMSD-S--TRSVLHEVMEQQTISIAITTLNARSSILASANPIGSR--YNPNLPVTENIDL-PP-P--LLSRFDLVYLVLDNELHLPISQD-LPVEFLTMYISYAKEHI-HPIITEAAKTELVRAVMRTRQLESMIRLAEAHAKMK-LKNVV-E--LE-DVQEAVRLIRSAIKDYAT------------ | |||||||||||||
2 | 3ja84 | 0.10 | 0.07 | 0.72 | 1.00 | DEthreader | --------------------FRKILD--ER-DEE-------------------------------LL-AY--KQTEDL-Y-HQLLNYP-QEVIS-----------IMDQTIYKVRPYNVNLKIE---------------------------DKRQITDQDLAKIREVAAREDLYSLLARSIAPSI-YELEDVKKGILLQLFGGTRGDINILLCPSSKSQILQYVHKITPRGVYTSGKGSSAVGLTAYITVLESGALVLDGVCCIDEFDKMS--D-STRSVLHEVMEQQTISIKITTLNARSSILASANPIGS--RYNPNLPVTENIDLP-PPLLSRF-DLVYLVLD-N-LHLNPHISQVLPVEFLTMYISYAKEHI-HPIITEAAKTELVRVGRTTRQLESMIRLAEAHAKM-KLKNVVELE-DVQEAVRLIRSAIKD-YA--T------------ | |||||||||||||
3 | 3ja82 | 0.16 | 0.15 | 0.91 | 5.42 | HHpred | -VTGVVTRRTGVF--------PQL---KYVKFNCLKCGSILGP-FFQDS-NEEIRISFCTNCKS--KGPFRNGEKTVYRNYQRVTLQEAPGVPPGRLPR-HR-EVILLADLVDVSPGEEVTGIYK---NNYDGNLNGVFATIIEANSIKRREVFSWTEEEEREFRKISRDRGIIDKIISSM--APSIYGRDIKTAVACSLFGGVPKNINVLLLGDPGTAKSQILEKTAHRAVFATGQGASAVGLTASVRKDEGGALADKGVCLIDEFDKMNDQDR---TSIHEAMEQQSISISKATLQARCSIIAAANPNGRYNPLAQNVSLTEPILSRFDVDEEADERSHVRSSPIPQELLMKYIYARTIPMDMDKVSRVYADLRRESIS-------TGSFPITVRHLESILRIAESFAKMRLSE-FVSSYDLDRAIKVVVDSFVDVRRQLRR----SFAIY--- | |||||||||||||
4 | 3ja842 | 0.13 | 0.07 | 0.56 | 0.71 | DisCoVER | -------------------------------------------------------------------------------------------------------------------------------------------------------KIRE-----V---A--ARE-DLYSLLARSIAPSI-YELEDVKKGILLQLFGGTNRGDINILLCGDPTSKSQILQYVTPRGVYTSGKGSSAVGLTAYILESGALVLSDGGVCCIDEFDKM-SDS--TRSVLHEVMEQQTISIGITTLNARSSILASANPISRYNPNLPVTENI-----DL--PPLLSR-FD-LV---YLVLDLAKHISDVLPVLTMYISYAKEHIH---PI-ITEAALVAYVGATTRQLESMIRLAEAHAKMKLKNV-V----ELEDVQEAVRLIRSAIKDY-------------- | |||||||||||||
5 | 3ja82 | 0.15 | 0.12 | 0.79 | 0.35 | MRFsearch | ---PFRVNG----------------------------------------------------------------EKTVYRNYQRVTLQEAPTVPPGRLP--RHREVILLADLVDV---SKPGEEVEVTGIYKNNYDGPVFATIIEANSIKRREVFSWTEEEEREFRKISRDRGIIDKIISSM--APSIYGRDIKTAVACSLFGGVPGDINVLLLGDPGTAKSQILEKTAHRAVFATGQGASAVGLTASVRKDGALVLADKGVCLIDEFDKM---NDQDRTSIHEAMEQQSISISKTTLQARCSIIAAANPNGGTLPLAQNVSLTEPILSRFDIDEEADERLATFVVDIPQELLMKYIHYALHQMDMDKVSRVYADLRRESI-------STGSFPITVRHLESILRIAESFAKMRLSE-FVSSYDLDRAIKVVVDSFVSVRRQLRRS----------- | |||||||||||||
6 | 3f8tA | 0.11 | 0.10 | 0.88 | 1.40 | SPARKS-K | EIVRTESFQRSLARVTSGKPVVLDLRELLASWIATH-----ARLVEPALRELVRTVAPDVELPHRFRRVIRPMGALISIEGVVREVRGAERLEHAIVDTGSELAVRLHGH------RLGPGLR-VEILGIVRSA-------TLDALEVHPIPEVHPD-PAELEEFRELADKDPLTTFARAIA---PLPAEEVGKMLALQLFSCVGKRLHVLLAGYPVVILHHVLDHLAPRGVYVDLRRTELTDLTAVLKEDRAGAAADGGILAVDHLEGAP---EPHRWALMEAMDKGTVTVDGIALNARCAVLAAINPGEPSDPPIARIDLDQDFLSHFVPSYTLLRRYLLYAREHPAPELTE--------EARKRLEHWYETRREEVEERLGMG--LPTLPVTRRQLESVERLAKAHARMRLSD-DVEPEDVDIAAELVDWYLETAMQ---------------- | |||||||||||||
7 | 3ja83 | 0.11 | 0.10 | 0.91 | 1.34 | MAPalign | -AVFGDRVRRFQEFLPHRIIISLDDLRRSFWSGILVE-PAYFIPPAEKALTDLADSSFKGLSPRTLTAQHL-NKLVSVEGIVTTSVRTFIDHQRITVQEMRSIDVILDDDLV----DKTKPGDRVNVVGVFKSLGAGGFKTLILGNTVYPLTGVAARQFDIRNINKLSKKKDIFDILSQSL-APSIYGHDHIKKAILLMLMGGVRGDINILMVGDPSTAKLRFVLNTASLAIATTGRGSSG-VGLTAARRLEAGAMVDRGVVCIDEFDKMT---DVDRVAIHEVMEQQTVTIIHTTLNARCSVIAAANP-VFGQYDVNRHQNI-ALPDSL------LSRFDLLFVVTDDDRSISEHVLRTHRVTIPFLRKYVQYAKEVIPLTEAINVIVKKSPITARTLETLIRLATAHAKVRLSKT-VNKVDAKVAANLLRFALL-------------------- | |||||||||||||
8 | 3ja82 | 0.11 | 0.11 | 0.98 | 0.85 | CEthreader | SESLEVNYRHLAESKAILAFLAKCPEEMLKIFDLVAMEATELHYPDYARIHSEIHVRISDFPTIYSLRELRESNLSSLVRVTGVVTRRNYQRVTLQEAPGTVPPRHREVILLADLVDVSKPGEEVEVTGIYKNNYDGNFATIIEANSIKRREVFSWTEEEEREFRKISRDRGIIDKIISSMAPSIYGH-RDIKTAVACSLFGGVPGDINVLLLGDPGTAKSQILKYVEHRAVFATGQGASAVGLTASVRKLEGGALADKGVCLIDEFDKM---NDQDRTSIHEAMEQQSISISKTTLQARCSIIAAANPNGGRYNSTLPLAQNVSLTEPILSRFDILCVVRDLVDEEADERLATFVVDSSSPIPQELLMKYIHYARTKIYPKVSRVYADLSFPITVRHLESILRIAESFAKMRLSEF-VSSYDLDRAIKVVVDSFVDAQKVSVRRQLRRSFAIY-- | |||||||||||||
9 | 3f8tA | 0.12 | 0.10 | 0.88 | 0.75 | MUSTER | LPVRTESFQRSLARVTSGKPV-RELDSDLASWI-----ATHARLVEPALRELVRTVAPDVEHRFRRVEIRPMDGALISIEGVVREVRGAERLEHAIVDTGSELVAVRL-------HRLGPG-ILGIVRSATL--------DALEVHKKDPIPEVHPD-PAELEEFRELADKDPLTTFARAI--APLPGAEEVGKMLALQLFSCVGKNLHVLLAGYPVVCSEILHHVLDPRGVYVDLRRTELTDLTAVLKEDRAGAAADGGILAVDHLEGA---PEPHRWALMEAMDKGTVTVDGIALNARCAVLAAINPGEPSDPPIARIDLDQDFLSHFVPSYTLLRRYLLYA----REHPAPEL-----EEARKRLEHWYETRREEVEERLGMG--LPTLPVTRRQLESVERLAKAHARMRLSD-DVEPEDVDIAAELVDWYLETAMQ---------------- | |||||||||||||
10 | 3ja84 | 0.15 | 0.13 | 0.87 | 2.69 | HHsearch | NLKGLVLRSTPVI--------P---DMKVAFFKCNVCDHTMA---VE-ID---RGVIQEPDCNE--PNSMSIHNRCSFADKQVIKLQETPDVPDGQTPH--SISLCVYDELVDSCAGDEVTGTFRSIPIRANSRQRVLYKTYVDVVHVKVSDKRQITDQDLAKIREVAAREDLYSLLARSI--APSIYEEDVKKGILLQLFGGTNKTINILLCGDPSTSKSQILHKITPRGVYTSGKGSSAVGLTAYITRDESGALSDGGVCCIDEFDKMSDSTR---SVLHEVMEQQTISIAKATLNARSSILASANPIGRYNPVTENIDLPPPLLSRFDVDEKNDRELAKHDDVLPVEFLTMYIYAKEIPAAKTELVRAYVGMRK----------------ATTRQLESMIRLAEAHAKMKLKN-VVELEDVQEAVRLIRSAIKDYAT---------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |