>PF13321 (304 residues) MINQKKYVHFVTMYIIIFSLWIFLIPKDLNIKEIGILFLFCFATLFSCYCLYKAIKKMKR GDKLFWVLVLCTCLCGLTMEITLFLHSLSIYDQVIFSYKALPFFIVQYILLFSGFAIKFI KHYSIRGLAQFSFDSIFIVIMNIYFTLTFILDISSFRMLTTDTWVLIGYFIAQSLVIYAV ISLYRREEYSSSRISLIIGFTIILVYGYIHLFQLNAGIKPSSEVSYLIHTASILLIGLSS ILYILDKPIQHETKTKYYRFDYVRFILPYFSIIITFSFIIFQPWDDKFMLIGLVLSLILL FLRQ |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MINQKKYVHFVTMYIIIFSLWIFLIPKDLNIKEIGILFLFCFATLFSCYCLYKAIKKMKRGDKLFWVLVLCTCLCGLTMEITLFLHSLSIYDQVIFSYKALPFFIVQYILLFSGFAIKFIKHYSIRGLAQFSFDSIFIVIMNIYFTLTFILDISSFRMLTTDTWVLIGYFIAQSLVIYAVISLYRREEYSSSRISLIIGFTIILVYGYIHLFQLNAGIKPSSEVSYLIHTASILLIGLSSILYILDKPIQHETKTKYYRFDYVRFILPYFSIIITFSFIIFQPWDDKFMLIGLVLSLILLFLRQ | |||||||||||||||||||
1 | 6ukjA | 0.10 | 0.09 | 0.90 | 1.19 | FFAS-3D | LIFKEFIYILSIIYLSVSVMNTIF------AKRTLNSFVTSETHNFICMIMFFIVYSLFGHRSFNLQFFAISM-LDACSVILAFIG-------LTRTTGNIQSFVLQLSIPINMFFCFL--ILRYRYHLYNYLGAVIIVVTIALVEMKLSFE-TQEENSIIFNLVLISSLIPVCFSNMTREIVFKKYKIDILRLNAMVSFFQLFTSNIKNGFACLFLGRNTVVKTFALFSFFDICDNLITSYIIDKFST------------MTYTIVSCIQGPALAIAYYFVREPRLLDFVTLFGYLFGSII-- | |||||||||||||
2 | 6t1zA | 0.12 | 0.12 | 0.97 | 1.10 | SPARKS-K | RNGRKPVMVFGTIIQLLGAALAIASNLHVNPWSTFIAFLLISFGYNFVITAGNAMIIDASNAENRKVVFMLDYWAQNLSVILGAALGAWLFRP--AFEALLVILLLTVLVSFFLTTYKTVLQDKTYMIFMGANIATTFIIMQFDNFLPVHLSNSFKTITYGQRMLTIYLILACVLVVLLMTTLNRLTKDWSHQKGFIWGSLFMAIGMIFSFLTTTF-TPIFIAGIVYTLGEIVYTPSVQTLGADLMNP-------EKIGSYNGVAAIKMPIASILAGLLVSISPMIKAIGVSLVLALTEVLAII | |||||||||||||
3 | 3rkoB | 0.07 | 0.07 | 0.94 | 1.42 | CNFpred | RGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYNGAAAMKAFTRVGDVFLAFALFILYNELGTLNFREMVELAPAHF-MLMWATLMLLGGAVGKSAQQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLM------TPEVLHLVGIVGAVTLLLAGFAALVQT--DIKRVLAYSTMSQIGYMFLALGVQAWDAA--IFHLMTHAFFKALLFLASGSVILACHHEQN-------FKMGGLRKSIPLVYLCFLVGGAALSALPLVTAGFFSKDEILAGAMAN | |||||||||||||
4 | 6eyuA | 0.07 | 0.05 | 0.71 | 0.65 | DisCoVER | --------------------MVYEAI-TAGGFG--SQPFILAYIITAMISGLLFLYLPLDVPQKFGIIHFFIVVWSGLMYTNFL-----NQSFLSDY-AWYMDWMVSTPLILLALGLTAFHGA---DT--KRYDLLGALL-GAEFTLVITGLLAQAQGSITPYY-VG--VLLLGVVYLLAFIAEESSDGLAAYKLAGYIGIFFLSYPTVWYISALPGSILDPTQTSIALVVLFFCKQVYGFLDMY--LIHKAELEH------------------------------------------------ | |||||||||||||
5 | 5b2nA | 0.06 | 0.04 | 0.71 | 0.83 | DEthreader | -----------------------------FEFIDHLLTMGVGVHFAALIFFLVVSQFVAPKYRIATALSCIVMVSAGLILNSQAVMWTAYYLLTFSNGYRYVNWMATIPCLLLQLL-IV-LNLKGKELFSTATWLILAAWGMIITGYV--GQL-YEVDDI-QLM-WGVSTAFFVVMNWIVGTKIFNTMTDSTITKVFWLMMFAWTLYPIAYLVPAFNGVVRQLLFTIADISSKVIYGLMITYIAIQQSAAA-GY-------------------------------------------------- | |||||||||||||
6 | 4xtlA | 0.09 | 0.07 | 0.81 | 0.49 | CEthreader | -------TQELGANFENFIGATEGFSEIAYQFTSHILTLGYAVMLAGLLYFILTIKNVDKKFQMSNILSAVVMVSAFLLLYAQAQNWTSSFTFNEEVGRRYLNWLIDVPMLLFQILFVVSLTTSKFSSVRNQFWFSGAMMIITGYIGQFYEVSNLTAFLVWGAISSAFFFHILWVMKKVINEGKEGISPANIWILFLISWTLYPGAYLMPYLTGVDGFLYGVMARQLVYTIADVSSVIYGVLLGNLAITLSNK--------------------------------------------------- | |||||||||||||
7 | 4z34A1 | 0.09 | 0.07 | 0.80 | 0.95 | EigenThreader | CFYNE-----------SIAFFYNRSGKHLATVSKLVMGLGITVCIFIMLANLLVMVANRRFHFYLMANLAAADFFAGLAYFYLMFNPNTRRLTVSTWLLRQGLIDTSLTASVANLLAIAIER-----HITVMSNRRVVVVIVVIWTMAIVMGNCSNMAPLYSDSYLVFWAIFNLVTFVVMVVLYAHYLLKTVVIVLGAFIICWTPGLVLLLLDVCCPQCDVLAYEKFFLLLAEFNSAMNPIIYSYRD--------KEMSATFRQILG------------------------------------- | |||||||||||||
8 | 5i20A | 0.06 | 0.05 | 0.87 | 0.25 | HHpred | -SRSSATLIGFTLWSTLALATSST-GAV---PPFLLTALTFTIGGAVGIAA--GLARGVSVLRQPWPVWVHGIGGLFGYHFFYFSAL--KLA--P-PAEAGLVA--YLWPLLIVLFSFLPGERL--RP-AHVAGALMGLAGTVV-----LLGARAGFGFAPEYVPGYLAAAACAVIWSVYSVASRRFARVPTEGFCLATAALSALC----HIL-FEPSVWPVG-SEWLAVVALGIGPIATWDIGMKR-G------DVRLLGVLSYAAPVLSTLLLV--VAGFAAPSGALAIACALIGGAAVA-- | |||||||||||||
9 | 6fv6A | 0.11 | 0.11 | 0.93 | 0.28 | MRFsearch | --GLFLSFLISLPLFFYGKDFVLFLMKVETVRSLAKEYLTPIFWFIPIGFLTNTFYGAYNDTKTPMKVAIIMNLTHIGTAYTLINLGVE---------GAGWGIAISEILAFFIYTFLLIFFLEPKLLFKMVRLGTPTALERAITTLSFNVFVGFLGLRIESISFMIGFGVMIASTTLAGQNYGARNYRGMVHAVNTSAHFTALVMSLTGLILILFPHIEWASYYLQIVGISQPAMAYASIYSGALK----------THIPLFVNISSFWLFRIIPSYFLLKVISPLVPWGFMTFETAVRALFY | |||||||||||||
10 | 6ob6A | 0.09 | 0.09 | 0.98 | 1.17 | FFAS-3D | --QDRYKAVWLIFFMLTLLPWNFFMTATQYFTNRLVRILGSLVAILLVFLITAILVKVQLDALPFFVITMIKIVLINSFGAILQGSLFGLAGLFPASYTAAIMSGQGLAGFFASVAMICAIASGSELSESAFGYFITACAVIILTIICYLGLPRYYQQSIKAILKKISVLAFSVCFIFTITIGMFPAVKSSRYFIPVSCFLTFNIFDWLGRSLTAVFMWPGKD-SRWLPSLVLARLVFVPLLLLCNIKPRRYLTVVFEHDAWFIFFMAAFAFSLCMCFGPKKVKPAEAETAGAIMAFFLCL--- | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |