>PF13317 (226 residues) LERDFEAFLRLSLKLDPQFVTPSFEDFLRAKLLDNNTPLTEQAVQRMLTHGQYAWAKRAL DKEFPDVVEILIRQAAEHGFAFAIRADWTAEDLVKASREWATAIVTEAKGDLSQVDMLAS QIKSAAADIREVEEKMQTPAWRLADSLRQRVYETKISVETSVGSTAREKLGELRCLLRLG IVYGSIQKQEAQQVLEYLRSLRPELFVEEPHDGFTRFAAWLRSIFA |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | LERDFEAFLRLSLKLDPQFVTPSFEDFLRAKLLDNNTPLTEQAVQRMLTHGQYAWAKRALDKEFPDVVEILIRQAAEHGFAFAIRADWTAEDLVKASREWATAIVTEAKGDLSQVDMLASQIKSAAADIREVEEKMQTPAWRLADSLRQRVYETKISVETSVGSTAREKLGELRCLLRLGIVYGSIQKQEAQQVLEYLRSLRPELFVEEPHDGFTRFAAWLRSIFA | |||||||||||||||||||
1 | 4akkA2 | 0.09 | 0.05 | 0.53 | 0.81 | DisCoVER | -------------------------------------QIAG------------------------------------RMVALYSFMQG-K--LA-GQE-RALGALGFARGQ---FSDELRQQLVDRIDGQQPC----FSFQALAQPPQTALFAEQCQLRRVACTRQPPADEGETALRWFCAQTRL---------------QLRGVE-----ELLIDLLPLVRQQA- | |||||||||||||
2 | 4ui9A | 0.10 | 0.08 | 0.85 | 0.83 | DEthreader | RSYSLAAGLALGMVCLGHGLMNVPEQLYQYMVGNVDVTCP-GATLALAMIYLKTNNRSIADWLRAPDTLLDFVK-PEFLLLTLRCLDDILNKWVDSN--VPQIIRE--NLNLETLSQAHVYIIAGA-CLSLGFRFAGS------------------------ASVTGPHNLETCLSVVLLSLAMAGLCRFLHMKTGMNYGF-PAHSTDNR--YHLQ-ALRHLYVAA | |||||||||||||
3 | 3w3tA | 0.08 | 0.08 | 0.99 | 0.56 | CEthreader | SVLKGKCMECATLIGFAVGKEKFHEHSQELISILVALQNSDDDALRSYLEQSWSRICRILGDDFVPLLPIVIPPLLITAKATQDVGLIEEEEAANFQQYPDWDVVQVQKHIAIHTSVLDDKVSAMELLQSYATLLRGQFAVYVKEVMEEIA--LPSLDFYLHDGVRAAGATLIPILLSCLLAATEELVLLWHKASSKLIGGLMSEPMPEITQVYHNSLVNGIKVMG | |||||||||||||
4 | 6wb92 | 0.09 | 0.09 | 0.96 | 0.75 | EigenThreader | LLQLENEMKIYMKSGDSALTFFLMEMLFYVLVYRNQDVDAQVVYNTLRDRLGEIMKATLLQINGNDKGAIEYLENLLNDDLE---YETDFVTYVSIAKKLIAIKTTSKNLSQESVLKEVVALTDKFYCLEQVLCITPFNYACFGRLSETLYYEALRSK----KQTKTELLEKALKNALRSVELSELYLKGWALVNIISRELG---RNKQNDLIKLSASKLKEISAK | |||||||||||||
5 | 4knhA | 0.14 | 0.12 | 0.82 | 0.31 | HHpred | ----------FKALIA--KPARDFVNDCL-KLAD-ELDLNEKESARILIDCDADVET--QSRPLLDCMRLILEIAADE--------DID-AGLQESFGVAAEDKIFGERQVKKFIPRCMEAMKGVRSMLQCMADKANARNM-----LQQASLDNQETLDFSRLSLVEQHECLASILHAAVQ-RHHATIADFQDFIKILRKWDK-------YDHFLLIPVLAAY--- | |||||||||||||
6 | 4knhA | 0.16 | 0.13 | 0.81 | 0.42 | MRFsearch | -EDFVNDCLKLADEL-------DLNEKESARILIDCRPLWECGVIRFHQERKY----------LLDCMRLILEIAADE---------DIDAGLQESFGVAAEDKIFGIRQVKKFIPRCMEAMKGVRSMLQCMADKANADNQETLDFSRLSLVE---------------QHECLASILHAAVQRHHATIADFQDFIKILRKWLNDFICKGLPVLGAAVRAWWIAEHN | |||||||||||||
7 | 6xnsA | 0.23 | 0.22 | 0.95 | 0.85 | FFAS-3D | LKTFLENLRRHLDRLDKHI------KQLRDILSEN--PEDERVKDVIDLSERSVRIVKTVIKIFEDSVRKLLKQINKEAEELAKSPD---PEDLKRAVELAEAVVRADPGSNLSPDALAAAARAASKNLAKAAQEIMRQASRAAEEAARRAKETLEKAEKDGDPETALKAVEARALNQIATMAGSEEAQEARVASEAARLAERVLELAEKPEVARRARELQEKVL- | |||||||||||||
8 | 6w2rA | 0.09 | 0.08 | 0.89 | 0.68 | SPARKS-K | ERRELEKVARKAIEAAREGNTDEVREQLQRALEIARESGT-KTAVKLALDVALRVAQEAAKRGNKDAIDEAAEVVVRIAEES------NNSDALEQALRVLEEIAKAVLKKTEDAKKAVKLVQEAYKAAQRAIEAAKRTIKLAIKLAKLAARAALEVIKRPKSEEVNEALKKIVKAIQEAVESLSGDPEKREKARERVREAVERAEEV------------------ | |||||||||||||
9 | 2qmrA | 0.11 | 0.10 | 0.89 | 0.67 | CNFpred | KESGILVLGAIAEGCMQGMI-PYLPELIPHLIQSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILD-----------SNKRVQEAACSAFATLEEEACELVPYLAYILDTLVFAFSKYQ------HKNLLILYDAIGTLADSVGHHLN------KPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVAQSGFLPYCEPVYQRCVNLVQKTLA | |||||||||||||
10 | 3feyA | 0.09 | 0.08 | 0.87 | 1.00 | DEthreader | VFREYHIVELELCKLQPGSLPQVLAQATEMLYRLTMNTCVDRFINWFSHHLSNFQFRWSW-EDWSCLKPKFVREVL----EKC------------MRLSYHQRILDIV-PP-TFSALCPANPTWRNHPQMIAVLVDICSTIRLFVIFQRFIMILTEHLVRCESVLTYKCIERLQQIFLQHHQ-I-IQQYMVTLENLLFTELDPHILA-----VFQQFCAL--QA-- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |