Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | EEYGLVYKSLPPYEVLYTKWLPYEDVLKLKRIEEMVEVYYNSGQFSYTLEHLVREFETPFAFFEKLGEYYEEHAFHMVSHSRITRYEILLAFAEKYAGKRVDLYRELLIFDLYLRENIKSRPTFAGENTTDKEWLGEFYEEESKEHKYLLGYEKYDKRQLRKMTHIEKFTYDVLGNGEKKETVILF |
1 | 4eqfA1 | 0.07 | 0.04 | 0.55 | 0.74 | DisCoVER | | ------------------------GYYFHTENPFK--DWP--GAFEEGLKRLKELP---VTILFMEAAIL-------QDPGDAEAWQFLGITQA-EN--ENEQAAIVALQRCLE---LQPNNLKA---------------------------------------LMALAVSYTNTSHQQDACEAL- |
2 | 6v69J | 0.07 | 0.06 | 0.81 | 0.83 | DEthreader | | IRETLWL----GVKKLIFVLVLEQIAAYGQVVFRLQEFIDEVQAFMWALYKYFI--SFKRLQLKVLHKVFS---TG-VAERASHLLNTLYKAILYTVSLLF-SLWVETVRPYTDGAREFITMVSFLKPV-LKQIIMAGKSMQLLKN--------------------LDDVHDPLLAICLPHID--- |
3 | 5hiuA | 0.08 | 0.08 | 0.95 | 0.48 | CEthreader | | ---------SPEQADLVAKLKNGHLSERVLAANKLRFAVVDFNPVHAIWHAAKDMIHPENPDNARQASWELLIECVKYPNSTELERSEYFHTLTGPAHSKDFCYQLVALEQLTNHGR-NIAGFYYEMFPLLTLWLNQAYRAARDARKLALARPASPEDKNLSQLFALVKDVIKFNFKFATDDVIAG |
4 | 4fdyA | 0.11 | 0.10 | 0.87 | 0.65 | EigenThreader | | SGGDVQSSLGLPPNSLSTEESIKQGVKYFSELLTSAEQQGVDIDSVIQSYNYG----------GGFLNYVRSHGKKYT-------YELAEQFSKEKSGGQYGNQFYVQLVSQ----YLTDTS----PTEFDDETVQVIKYEGLIQWVYDKAGISLPRQYDATQAGDLIFFHSTYNAGTYVTHVAIY |
5 | 1vt4I | 0.12 | 0.11 | 0.92 | 0.31 | HHpred | | --------QDMPKSILSKTLLSKQEEMVQKFVEEVLRINYK---FLMSPIKTEQRQPTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAGWVALDVCLKVQCKMDFK----IFWLNLKNNSPETVLEYQIDPNNIKLRIAELRRLLKSKPYENCLLVLLNVQNAKNALSCKILLTT |
6 | 6vq6d | 0.12 | 0.08 | 0.62 | 0.42 | MRFsearch | | ---------------------EQMEAVNIAQPAELYNAILVDTPLAAFFQDCISEQMNIEIIRNTLYKAY---------------LESFYKFCTLLGGTTADAMCPILEFEA------------------DRRAFIITINSKEDRAKLFPHCGRLYPEGLAQLADYEQVK---------------- |
7 | 6bs9A | 0.12 | 0.08 | 0.65 | 0.68 | FFAS-3D | | ----------------------MERPRQIRQLRAALEIMYGHTPLHTASQQIAKQLAQPVTLFSAFSDQLDKGS-----DSAKTAWEQSLKKVWDTLSLKKSEYEVLKQFGETLGI------------HDRISQQKHIKLALTHLEASEADA----EQAQAKN----------------------- |
8 | 5cwcA | 0.10 | 0.09 | 0.90 | 0.77 | SPARKS-K | | ERLVKICVENAKRKGDDTEEAREAAREAFELVREAAERALAIRLIKECVENAQREGYDAAEAFKRVAEAAKRAGI-TSSEVLELAIRLIKECVENAQGYDISEACRAAAEAFKRVAEAAKRAG-ITSSETLKRAIEEIRKRVEEAQRESEACRQAAEEFRKKAEELKRR----------------- |
9 | 5cwbA | 0.13 | 0.09 | 0.69 | 0.60 | CNFpred | | ---------------------SYEVICECRIVAEIVEALKRSTSEDEIAEIVA-------RVISEVIRTLKESGSSY-EVICECVARIVAEIVEALKGTSEDEIAEIVARVISEV------IRTLKESGSSYEVIKECVQRVEEIVEALKRS-GTSEDEINEIV---------------------- |
10 | 2cse1 | 0.04 | 0.03 | 0.87 | 0.83 | DEthreader | | KPSSVELEPHEYGRLSI-A-TYGIAESQARQI-KAPLEKFVLALLVSENAILQQALVGVCSGIFPVGKE-RA-SSAEEPWP--AILDQIMGIFFNGVHDGLQWWIRYSWALCCASYPMWSFYWGLTGGYSWISLIRPLMTRWM-VA------NGYAAYRCFNIKL------GI-PLNSDLAT---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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