Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | RLAKVETAIFRNKTITFDYYTMARDETGARKVDPYHLLFQGGQFYLLGHSHERGALRVFRLSRIRGKVAYATKAEHDFKKPADFDPRTYSNRAEWQYGDVVDTAEVWIGGRIAWQVERHFGRFGEVRPADEGDGAIVFSTPYASDRQLAAWVLRLGEHARVLGPPALRDVIDERIEL |
1 | 6sj9A | 0.13 | 0.11 | 0.80 | 1.00 | DEthreader | | ----TPAESTVL---GSRWYRLSRTT-LDLN---------RTILSLPYPDD-----L-L----IQWEHVYISEHLLNRPVRFSEEAAALGD---LFPGEDDVLVCLELTRQGAG-LAD-DYYAERTAPL--PDGGLLAEVRFGDAGWLP-FVSQHGGSVRILEPESLRQETRAWIDA |
2 | 6sj9A | 0.26 | 0.17 | 0.66 | 0.83 | DEthreader | | QFDDVVAA-HGKHPIRFGYQAVSTGREEVREVEPWGLGSRFGQWYLVGLDRGRGAKRVFRLSR-TT-A--ISVLTGSFHPPKDFNARAELDEL--NE-------VRQATLV-------------KKATSLQDARITVDFR--------------GPAE------------------- |
3 | 6sj9A | 0.26 | 0.25 | 0.94 | 2.80 | HHpred | | AFDDVV-AAHGKHPIRFGYQAVSTGREEVREVEPWGLGSRFGQWYLVGLDRGRGAKRVFRLSRTTA-I--SVLTTGSFHPPKDFNARAELDELN---ELPVRQATLVIDKDKLLALRKKA---TSLQDAPDESGRDRITVDFRDPEQLAEELASYGPHVKVTGPAELSAAVVRRLQA |
4 | 6sj9A2 | 0.32 | 0.16 | 0.49 | 1.54 | DisCoVER | | QADDVVAA-HGKHPIRFGYQAVSTGREEVREVEPWGLGSRFGQWYLVGLDRGRGAKRVFRLSRTT----AISVLTTGSFHPKDFNARAEL----DE--------------------------------------------------------------------------------- |
5 | 6sj9A | 0.26 | 0.24 | 0.93 | 1.38 | MRFsearch | | --FDDVVAAHGKHPIRFGYQAVSTGREEVREVEPWGLGSRFGQWYLVGLDRGRGAKRVFRLSRTTA----ISVLTGSFHPPKDFNARAELDELNE---LPVRQATLVIDKDKLLALRKKATS-LQDAPDE--SGRDRITVDFRDPEQLAEELASYGPHVKVTGPAELSAAVVRRLQA |
6 | 6sj9A | 0.27 | 0.25 | 0.94 | 2.01 | SPARKS-K | | AFDDVVAA-HGKHPIRFGYQAVSTGREEVREVEPWGLGSRFGQWYLVGLDRGRGAKRVFRLSRTTA----ISVLTGSFHPPKDFNARAELDELN---ELPVRQATLVIDKDKLLALRKK---ATSLQDAPDESGRDRITVDFRDPEQLAEELASYGPHVKVTGPAELSAAVVRRLQA |
7 | 6sj9A | 0.25 | 0.24 | 0.93 | 1.71 | MAPalign | | PAGQAFDDVVAKHPIRFGYQAVSTGREEVREVEPWGLGSRFGQWYLVGLDRGRGAKRVFRLSR-TT-A--ISVLTGSFHPPKDFNARAELD---ELNELPVRQATLVIDKDKLLALRK---KATSLQDAPDESGRDRITVDFRDPEQLAEELASYGPHVKVTGPAELSAAVVRRL-- |
8 | 6sj9A | 0.26 | 0.25 | 0.95 | 1.75 | CEthreader | | QAFDDVVAAHGKHPIRFGYQAVSTGREEVREVEPWGLGSRFGQWYLVGLDRGRGAKRVFRLSRTT---AISVLTTGSFHPPKDFNARAELDELN---ELPVRQATLVIDKDKLLALRKKA---TSLQDAPDESGRDRITVDFRDPEQLAEELASYGPHVKVTGPAELSAAVVRRLQA |
9 | 6sj9A | 0.21 | 0.20 | 0.94 | 1.39 | MUSTER | | AFAAITQAIREGRQLRLRYFSLQRDEVTERDVDPLRLYSLDSTWYFEAYCHSKAGVRNFRLDRVESLEPNGRAVSGSA-TAGQDFPA-----RLFTPGEDDVLVCLELTRQGAGLADDYYAE----RTAPLPDGGLLAEVRFGDAGWLP-FVSQHGGSVRILEPESLRQETRAWIDA |
10 | 6sj9A | 0.26 | 0.24 | 0.94 | 3.59 | HHsearch | | AFDDVV-AAHGKHPIRFGYQAVSTGREEVREVEPWGLGSRFGQWYLVGLDRGRGAKRVFRLSRTTA----ISVLTGSFHPPKDFNARAELDELN---ELPVRQATLVIDKDKLLALRKKATSLQ-DA--PDESGRDRITVDFRDPEQLAEELASYGPHVKVTGPAELSAAVVRRLQA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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