Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | PIEPPEGLRACCAFGYDLKTEVVGIPVPFYDIDNIVEAEKLGEHHYNDSALGASAALLGISNEKIGLLYTQKGGFIDISHVRDTADYTLYLFSQIYAHLGQERKLSLSNELAARKIHFFAFTPPVDPVERYTLSAYLAAKLAFQLAAWHEIAQWYGYQSVPGFPEGISAFSPEDLYSNLLGARLALTLILQGHASSVTQFTTSMAAILPSALHKLEPYSKSDTKKMFNQVDGLWWNSHERIPQKFLVLRRNYEIQDNRYPL |
1 | 5injA | 0.07 | 0.05 | 0.73 | 0.57 | DisCoVER | | ESLGSPPSRTFLSDDHTPVEFSLAFLPGPHLR--VL----VEPGCSSGDDLAENGRAGLAVPLALWCALELR-GVKVYLNPANARLGHLQAFDALPR-ADGFPFLALDLGAPRVKIYLKHL--RLAGRPALTCHSFTGR-PSGYVRDYVRHDGMDLAAVSPRPLSDGVGLIAYLALV-------HQ--R-------------------------------------P-TRVTVYVSSEAYEV---RPP-RET-V------- |
2 | 3tonA | 0.10 | 0.07 | 0.65 | 0.67 | DEthreader | | --------------GRPV--------VPYWSLG-FQLCRIYSDIYMLDFTLSPKFA-GFPALINRMK---------VIL--IL--DP-AI--VFIKYPNDGDIVWGKPDFPRAYVAVGCDSLPPMDRGLSSKTLCHVHNLYGWSQTRPTYEAVQEV--------TGQRGVVGRWAGH-WL--GD----------------------DICGFFCWLGALRYTLLPYLYTLMHKAHTE--------QSIDTYG---------- |
3 | 1dofA | 0.10 | 0.10 | 1.00 | 0.59 | CEthreader | | ASVSADEVHDILSLVLLLEQKSGCRYVHYGATSNDIIDTAWALLIRRALAAVKEKARAVGDQLASMARKYKTLGFKFANYYYELYIACRQLALAEEFIRAKIGGAVGTMASWGELGLEHVITTQVAPRESFAVLASALALMAAVFERLAVEIRELSRPEIGEVVEGANPTASERIVSLARYVRALTHVAFENWIPEALLALDEILTSALRVLKNVYIDEERITENLQKALPYILTEFHMNRMIKEGASRAEAYKKAKEVKA |
4 | 2cse1 | 0.09 | 0.07 | 0.85 | 0.60 | EigenThreader | | YDEIPDLSHNISGPLPDRAPYLYLSMSPRMTSANLAILQQTAGLDPSLVKLGVQICLHAAASHSMYYCPMYMGVMPLSYLYRTWYLAAARMAATKIFQAAQMGLRNQ---VQRRPRSIM-----PLN--VPQQQVSAPHTLTADYINY----------HMNLSTTSGSAPLGVYASSPLSVIMAAIHEGVASGSIGK----PMQNMIQHLSKLYKR--------------GRVNDSFSPGNDFTHMTTTFPSGSTATSTEH |
5 | 2ns6A | 0.11 | 0.07 | 0.63 | 0.30 | HHpred | | ---------------YHLTAKTGS------G-GQ----SARAKADYIQR--------EGKYARDDEVLHAES------GHMPEFVERPADYWDAADLYERAN-------GRLFKEVEFALP-VELTLDQQKALASEFAQHLTGAEYTIHA----GGGECHLMISERIDGIERAQWFKR-YNGKTPGGAQKTEALKPLEQTREAWADHANRALERAGH-------------------------------------------- |
6 | 5cjeA | 0.15 | 0.08 | 0.58 | 0.38 | MRFsearch | | ---------------------------------------------------------------------------IDLGEYGARFTEDPYPVYAELRERGPVHWVRTPPPEAFEGWLVVGHELVVDPPEHTRLRSLVARAFRIQEITDGLLDEMLPRGRADLVDSFA-YPLPITVICELLGVALSNEIVAPTGGDAELAAYERLAAYLDELIDDKRRLSGEELRAMA---------------------------------- |
7 | 2wuiA | 0.12 | 0.08 | 0.65 | 0.55 | FFAS-3D | | --------------------------------DGILDARVFLEKGVGTTAMADLADAAGVSR---GAVY---------GHYKNKIEVCLAMCDRAFGQIEVP-----------------DENARVPALDILLRAGMGFLRQCCEPGSVQRVLEILYLKCERSDENEPLLRRRELLEKQGQRFGLQIRRAVERGELPARLDVELASIYLQSLWDGIRDDPWNRAERMFRAG------------------------------- |
8 | 5b4sA | 0.19 | 0.16 | 0.87 | 0.55 | SPARKS-K | | ----AAGVIPVGVYGAVFKLTVLSDAYPENGTTNYQEV---GPWRYCEVDYEAAQ---GISDYR-GDTFGPVG----VTTVGDFPDYFKKAFAPYVLG-KSNAT---NADLADDTALDPYPSKSRSDKNKRAALTKICGALQSAFDTYAHIDQDKGFTAFDRYNLVGLAFQVQVNTS--IGSISAFSSVKSAGLSAETCFATYLTDQYIRWLKKDPTGSVSVVNQVINASSGKCPTSGIKWSKNSWQ-------------- |
9 | 2av8A | 0.10 | 0.05 | 0.52 | 0.69 | CNFpred | | --------------------------------------------------------------------------------IQKRAEGISSYYDELIEMT-GEGTHTVN----GKTVTVSL------RELKKKLYLCLMSVNALEARFYVSFACSFAFAERELMEGNAKRLIARDEALHLTGTQHMLNLLRSGADPEMAEIAEECKQECYDLFVQA----AQQEKDWADYL------------------------------- |
10 | 4djiA | 0.07 | 0.05 | 0.66 | 0.67 | DEthreader | | LFATASMVM-----AMAGWEE----GGVFASPRWGFA----------------------------AISF------GYLQIAIGFIPMLYFVLGALSYILKWPA--------------L--------NE-DPITKTIAALIILWALALTQFGGTKYTARIAKFF-SWVGRVPTLVISQLVITSIALIILTNTGGNNMFLIALALTVLVSFLVVLALPFILY-AVHD---A--NTG-V--TLEPINHYIVM------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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