>PF13251 (182 residues) RVRQTALGCFNAVIKGTDRRVMFGYWTSFIPDALGSGSSQSHTLFTVILKDPVPKTRTAA IAALGSLLEGSKQYLAAADDSEQHKAAFTSYSVVLGLMIKEIHRCLLVALVAENSPLAIT QIIKCLATLVPNVPYQKLKPGLLSRISKQIRPFISHRDPNVRVACLTCLGAIVTVQAPLM EV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | RVRQTALGCFNAVIKGTDRRVMFGYWTSFIPDALGSGSSQSHTLFTVILKDPVPKTRTAAIAALGSLLEGSKQYLAAADDSEQHKAAFTSYSVVLGLMIKEIHRCLLVALVAENSPLAITQIIKCLATLVPNVPYQKLKPGLLSRISKQIRPFISHRDPNVRVACLTCLGAIVTVQAPLMEV | |||||||||||||||||||
1 | 5hb4B | 0.09 | 0.08 | 0.86 | 1.17 | DEthreader | ASRAAIFEYIGKELCSVSQPIKRQIFDALNGQ-------TIPSIFDFF-DFIRLNLLQAWANLLLVMIESND--FK-ST-------------P-KMAFLLQALQAILPTLEAFLKSDEAFELARVAKVLLWKLDFFVGNGDKLFQLFQLCLSAICSGTPELRSLYYSICYRYLTAVVDTSVA | |||||||||||||
2 | 5hb4B | 0.10 | 0.09 | 0.89 | 1.17 | DEthreader | RLLQAWANLLLVMIESNDFKPKMAFLLQALQ-----------AILPTLEAFLKSDEAFELARVAKVLLWKLDF---GL------DREQFTVGNLIGDKLFQLFQLCLSAISQSGTPELRSLYYSICYRYLTAVVDTARRLKAITLYGDLLNVICDDYGSTCQTAAMILLNALVHTRASSDCP | |||||||||||||
3 | 1b3uA3 | 0.16 | 0.13 | 0.84 | 1.05 | FFAS-3D | RVRLAIIEYMPLLAGQLGVEFF---DEKLNS------------LCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATILAMSGDPNYLHRMTTLFCINVLSEVCVLRMAGDPVANVRFNVAKSLQKIGPILDNST----LQSEVKPILEKLTQDQDVDVKYFAQEALTVL---------- | |||||||||||||
4 | 5hb4B | 0.07 | 0.07 | 0.91 | 1.17 | DEthreader | LSVRCIFYVLKALMIRKELDAMWRWVEAWMNPPGP---QECMEMFREFGT-GFE-QSNAFIQLLTTLLVPPNSVPFPE-----------WLGSSRTLGIEPYVDFVFDVFNRTILRILRLSCLDFVMVCLVTFVPFSRVMEWLFNVITSLINTIHQDLVVSILRAIQVMIKALELTYLVEVQ | |||||||||||||
5 | 1u6gC | 0.14 | 0.12 | 0.84 | 1.17 | DEthreader | NVKADVFHAYLSLLKQTRPTPLTMLQSQVPNI--------VKALHKQMKE-KSVKTRQCCFNMLTELVNVLPG-A-------------------LTQHIPVLVPGIIFSLNDKSSSNLKIDALSCLYVILCNHSPQVF-HPHVQALVPPVVACVGDPFYKITSEALLVTQQLVKVRPPSSFD | |||||||||||||
6 | 4knhA | 0.09 | 0.08 | 0.93 | 1.17 | DEthreader | RLRACIFYVLKALMIRKTHEELDAMWRWVEAWMTN-PGPQCMEMMFEFGT-G-FEQSNAFIQLLTTLLVPPLNSVP-F---------PEWLGSSRTLGIEPYVDFVFDVFARTILRILRLSCLDFVMVCLVTFVPFSRVMEWLFNVITSLINTIHQLLVVSILRAIQVMIKALELQELHYSA | |||||||||||||
7 | 4ifqA | 0.12 | 0.11 | 0.93 | 1.17 | DEthreader | TKNVGAFKVISNLVPKLSRTKFWSFLDSLIKDSSLNYSSSYRNAFTNV-LTKY-SDVLGFLQLFHNLISIHVKLAFPT-----------RLGQYRKVGIWPYFDYIFNILAHVIKRAVQLPILKIIYTGLCSFDYVQIPFNYIFTIYKSIFNVVDVGVAELLQLAVKIINKVLDYTYELIVG | |||||||||||||
8 | 4knhA1 | 0.09 | 0.08 | 0.94 | 1.17 | DEthreader | RLRACIFYVLKALMIRKTHEELDAMWRWVEMTNPGP-QECMEMMFREFGT-G-FEQSNAFIQLLTTLLVPPNSVPFPE--------WLGSSRTLGIEPYVDFVFDVFNRTKDISLRILRLSCLDFVMVCLVTFHPFSRVMEWLFNVITSLINTIHQDLVVSILRAIQVMIKALELETYLHRS | |||||||||||||
9 | 4knhA1 | 0.09 | 0.08 | 0.93 | 1.17 | DEthreader | RLRACIFYVLKALMIRKTHEELDAMWRWVEAWMTN-PGPQCMEMMFEFGT-G-FEQSNAFIQLLTTLLVPPLNSVP-F---------PEWLGSSRTLGIEPYVDFVFDVFARTILRILRLSCLDFVMVCLVTFVPFSRVMEWLFNVITSLINTIHQLLVVSILRAIQVMIKALELQELHYSA | |||||||||||||
10 | 6tc0C | 0.16 | 0.13 | 0.84 | 0.81 | HHpred | KLVWPSAKLLQAAAG-ASARACEHLTSNVLP-----------LLLEQFHKHSQSNQRRTILEMILGFLKLQQKWS-----YE------DRDERPLSSFKDQLCSLVFMALT-DPSTQLQLVGIRTLTVLGAQPGL--LSAEDLELAVGHLYRLTFLEDSQCRVAALEASGTLATLYPG---- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |