>PF13249 (290 residues) IQRAQDYLLSIQYPEGYWWGELETNVCMAAEYLLLTHFLGAADRRRWDKIVEYLRRQQLP DGTWSIYHGGPSDLNATVEAYFALKLAGVSPDEPSMAKARQFVLSRGGVPKVRIFTKIWL ALFGQWDWRGVPVLPPELMLLPSWFPINIYEFASWARATVVPMLIILTRRPVCPIPGEAH IDELYPAPREQVDYSLPKSDRLLSWKTLFLTTDKLLRLYERWGWKPFRRRAARAAEEWIV EHQEADGSWGGIQPPWVYSLIALKVLGYPLDHPVMAKGLEGFEGFAIEDE |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | IQRAQDYLLSIQYPEGYWWGELETNVCMAAEYLLLTHFLGAADRRRWDKIVEYLRRQQLPDGTWSIYHGGPSDLNATVEAYFALKLAGVSPDEPSMAKARQFVLSRGGVPKVRIFTKIWLALFGQWDWRGVPVLPPELMLLPSWFPINIYEFASWARATVVPMLIILTRRPVCPIPGEAHIDELYPAPREQVDYSLPKSDRLLSWKTLFLTTDKLLRLYERWGWKPFRRRAARAAEEWIVEHQEADGSWGGIQPPWVYSLIALKVLGYPLDHPVMAKGLEGFEGFAIEDE | |||||||||||||||||||
1 | 6u4zA | 0.10 | 0.09 | 0.89 | 1.00 | DEthreader | MFCAHSMMTCVIYYHTCWQTYDAVGQGGGLSAFVALREASVEYRSLEDDMFKGIQHFWVTDTAYSVYPDGNDRFYDNVWIGLDMAWYSKDVRYLNQAKAVWDYLSQYGWDVHWHCSTAPTG--------------------LYQLTHEQKYLDKAIECFNWLQAMQDPSDHL-YYD--N-VSP-DPEDPTQPGRM-E----TNKYSYNSGQPLQLACLLYKITKNESYLTVAHQIAEACHKWFTYSILAPGHAWFNTVMCRGFFELYNPSYLEDVRNTMLHAWHHGLIW- | |||||||||||||
2 | 6ttjA | 0.10 | 0.09 | 0.92 | 1.17 | DEthreader | MAEAWEALRRSMVFFPVTLAYDQVFVRDFVPSALAFL--MNGEPDIVKHFLLKTLQLQGWEGVMPAADGEVAPVDSGFWWIILLRAYTLSECQKGMKLILSLCLAEG--FDTFPT--------------YGYPIQAFFMALRSALIIVKRLHALSFHMRNYF-WLDHQNLNDIYRFKTETAVNKF-NV-MPDSIPEWVFDFMGDFRWFALGNCVSILSS--L-ATPDQSMAIMDLLEHRWALVGEMPLKGSWPVLLWQLTAACIKTGRPQIARRAVDLIERLHCWPKYQT | |||||||||||||
3 | 3sqcA | 0.49 | 0.48 | 0.98 | 12.61 | HHpred | LDRAVEYLLSCQKDEGYWWGPLLSNVTMEAEYVLLCHILDRVDRDRMEKIRRYLLHEQREDGTWALYPGGPPDLDTTIEAYVALKYIGMSRDEEPMQKALRFIQSQGGIESSRVFTRMWLALVGEYPWEKVPMVPPEIMFLGKRMPLNIYEFGSWARATVVALSIVMSRQPVFPLPERARVPELYETDVPPRRRGA-----KGGGGWIFDALDRALHGYQKLSVHPFRRAAEIRALDWLLERQAGDGSWGGIQPPWFYALIALKILDMT-QHPAFIKGWEGLELYGVELD | |||||||||||||
4 | 3sqcA1 | 0.21 | 0.18 | 0.85 | 0.78 | DisCoVER | LDRAVEYLLSCQKDEGYWWGPLLSPVWDTGLAVLALRAAGPADHDRLVKAGEWLLDRQITPGGFAFQFVYYPDVCDTAVVVWALNTLRLRRRRDAMTKGFRWIVGMGAYEDVTAHVLECFDGSWFGRWGVNYLYTGAVVSALKAVGID--TREYIQKALDWVEQHQNPDGGWGEDCR-------SY--EDPAYAGKGAS--------TPSQTAWALMALIAGGR--AESEAARRGVQYLVETQRPDGGWDTTMYRHVFPTLALGRYA----------------------- | |||||||||||||
5 | 3sqcA | 0.49 | 0.48 | 0.98 | 0.70 | MRFsearch | LDRAVEYLLSCQKDEGYWWGPLLSNVTMEAEYVLLCHILDRVDRDRMEKIRRYLLHEQREDGTWALYPGGPPDLDTTIEAYVALKYIGMSRDEEPMQKALRFIQSQGGIESSRVFTRMWLALVGEYPWEKVPMVPPEIMFLGKRMPLNIYEFGSWARATVVALSIVMSRQPVFPLPERARVPELYETDVPPRRRGAK-----GGGGWIFDALDRALHGYQKLSVHPFRRAAEIRALDWLLERQAGDGSWGGIQPPWFYALIALKILDMT-QHPAFIKGWEGLELYGVELD | |||||||||||||
6 | 3sqcA2 | 0.48 | 0.43 | 0.90 | 1.55 | SPARKS-K | ------------------------NVTMEAEYVLLCHILDRVDRDRMEKIRRYLLHEQREDGTWALYPGGPPDLDTTIEAYVALKYIGMSRDEEPMQKALRFIQSQGGIESSRVFTRMWLALVGEYPWEKVPMVPPEIMFLGKRMPLNIYEFGSWARATVVALSIVMSRQPVFPLPERARVPELYETDVPPRRRGAKGGG-----GWIFDALDRALHGYQKLSVHPFRRAAEIRALDWLLERQAGDGSWGGIQPPWFYALIALKILDM-TQHPAFIKGWEGLELYGVELD | |||||||||||||
7 | 3wkfA | 0.10 | 0.09 | 0.91 | 0.68 | MAPalign | LTNILKFWATTHDVHGGFVGRVPRGAILNARILWTFAAAPLY-REMAERAYRYFVRFVDEHGGVYWMVDTRKHVYAQSFAIYALSEWEAALA--LARSIYDLIETHCADRVHGGYVEACALDAPEPRSMNT--HLHVLEAYANLYWPETELAARLQALIELFLRIYHPATGHL--------ILFFDERWRPR-----------SRAVSFGHDIEASWLLLEAVLRPRVQQASLHLARATLAGRAPDGSLYRHWWPQAEALVGFLNAESLFY-EAAEDVWRYIREQRDT-- | |||||||||||||
8 | 6ij1A | 0.14 | 0.13 | 0.89 | 0.51 | CEthreader | VRRGVDFLLDRREADGRWVDYDLLGDWITAYVAGVLVQLPHEAGRAGRAAMDLLVPEQHDNGGWNYSEVAPEDADSTGWVLRLAELLGR-SGEPWARPGWEFLARHVHDDGLTYVPDLAKAAFDRYPVVPSWDGWCGGHVCVTAAVAGLAGLPRREHVVNGLLRAQRPTGEWPA----------------------------YWWIDPELSTALAVESLATVPGT---EPARAAAARWAAGRIGADGAVTGSPFATALALRAVAQGEPGFGDAQIRAAAGWLTRHQRPDG | |||||||||||||
9 | 3sqcA | 0.49 | 0.48 | 0.98 | 1.55 | MUSTER | LDRAVEYLLSCQKDEGYWWGPLLSNVTMEAEYVLLCHILDRVDRDRMEKIRRYLLHEQREDGTWALYPGGPPDLDTTIEAYVALKYIGMSRDEEPMQKALRFIQSQGGIESSRVFTRMWLALVGEYPWEKVPMVPPEIMFLGKRMPLNIYEFGSWARATVVALSIVMSRQPVFPLPERARVPELYETDVPPRRRG-----AKGGGGWIFDALDRALHGYQKLSVHPFRRAAEIRALDWLLERQAGDGSWGGIQPPWFYALIALKILDM-TQHPAFIKGWEGLELYGVELD | |||||||||||||
10 | 1w6jA | 0.23 | 0.23 | 1.00 | 2.28 | HHsearch | ALNGMTFYVGLQAEDGHWTGDYGGPLFLLPGLLITCHVARILPAGYREEIVRYLRSVQLPDGGWGLHIEDKSTVFGTALNYVSLRILGVGPDDPDLVRARNILHKKGGAVAIPSWGKFWLAVLNVYSWEGLNTLFPEMWLFPDWAPAHPSTLWCHCRQVYLPMSYCYAVRLSAAEDPLVSLQELYVEDFANPPDYQFHINPDGGFGTYVECTSAVMQALKYFHKRPEIRETLTQGLEFCRRQQRADGSWEGFTYGTWFGLEAFACMGQTYACAEVSRACDFLLSRQMADG | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |