Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | KEESVRRLFGIGFGVGYPLANITISVPYVDIDLGYGGFVGLKPNNFLPYVVMGVDLLFKDEIHKNTMISGGIGIGADWSKGSPEKSNEKLEEEEENEAQQVASLQNRIGVVIRLPLVIEYSFLKNIVIGFKAVATIGTTMLLGSPMSFEGARFNFLGTGFIKI |
1 | 3p9dC1 | 0.07 | 0.04 | 0.60 | 0.61 | DisCoVER | | --------K-GVL------LNKDVVHKMSRHIENP------------------RVVLLDCPLEYMCQILPTLVI--------------------------TEKGVSDAQHYLLKGCSVLRRVKKSDNNRIAR------VTGATIVNRVEVGTCGLFKVSFLD- |
2 | 5xjcQ | 0.06 | 0.04 | 0.77 | 0.67 | DEthreader | | ILFRSENFVLILMDCV-V----------------P----DWLHDIIPSLTMVAVIRTL----------NQLNLFIIDRHLRVVLAIEEESYTCAGFQLEEFRYLKEAKII-A--MTCTHLKRHVKLFKYDNILMAAETFIPLLLQNPRLKRWIMIGSLF---- |
3 | 4rlcA | 0.08 | 0.07 | 0.80 | 0.79 | CEthreader | | -QGQNSVEIEAFGKRDLYGGSIGYFLTDDVELALSYGEYHDVVHGNLTSLDAIYHFGTP---GVGLRPYVSAGLAHQNITNI-----------------NSDSQGRQQMTMANIGAGLKYYFTENFFAKASLDGQYGL-----------EKGEWMAGLGVGFN |
4 | 2i69A1 | 0.03 | 0.02 | 0.92 | 0.65 | EigenThreader | | NCLGMSNRDFLEGVSGATWVDLVLEGDSCVTIMSKDKPT-----------IDVKMMNMEAANLAEVRYLATVSDLSTKAACPTMGEAHNDKRADPWGNGCGLFGKGSIDTCAKFACSTRTILKENIKYEVAIFVHQAGRFSITPAAPSYTL--KLVTVDCEPR |
5 | 2k0lA | 0.16 | 0.14 | 0.86 | 0.37 | HHpred | | NGPTRNDQLGAGAFGGYQVN------PYLGFEMGYDWLGRMAYGAFKAQ-GVQLTAKLGYPITDDLDIYTRLGGMVWRADSKGNYAST-----------GVSRSEHDTGVSPVFAGGVEWAVTRDIATRLEYVNNIGDAGTVTRPDLSLGVSYRFGQE----- |
6 | 1p4tA | 0.10 | 0.07 | 0.74 | 0.75 | MRFsearch | | ---GSAKGFSPRISAGYRINDLRFAVDYTRYKNY-----------DFKLYSIGASAIYDFDTPVKPYLGARLSLNRASVD------------------------FSQTSIGLGVLTGVSYAVTPNVDLDAGYRY-----NYIGKVNTVKNVRSGELSAGVRVK |
7 | 1p4tA | 0.12 | 0.10 | 0.81 | 0.34 | FFAS-3D | | -SLGSAKGFSPRISAGYRINDLRFAVDYTRYKNYKAPSTDFKLYS------IGASAIYDFDTQSPVKPYLGARLSLNRASVDLGGSDSFSQT----------------SIGLGVLTGVSYAVTPNVDLDAGYIGKVNTVKNVRSGELSAGVRVKF-------- |
8 | 1i5pA | 0.15 | 0.13 | 0.87 | 0.64 | SPARKS-K | | RNEDLTRPLHYNQTPGGARAYLVSVHNRKNNIYAAGTMIHLAPEDYTGFTISPIHA-TQVNNQTRTFISEKFGNQGDSLRFEQSN--------------------TTARYTLRGNLYLRVSSIGNSTIRVTINGRVYTVSNVNTTTNNDGVNDNGARFSDINI |
9 | 3eqnA | 0.09 | 0.07 | 0.79 | 0.95 | CNFpred | | --------FLGDLVFNGGNIGATFGNQFTVRNLTFNNA------NTAINAIWNWGWTFQRIT------INNCQVGFDLTQGGTSNTGAQGV--------------GAEAIIDA-QTFVRWSGASQGSLVLNNIQLTNVPVAVGVVLAGGTTTINSWAQGNVYH |
10 | 2lkfA | 0.04 | 0.04 | 0.89 | 0.83 | DEthreader | | VVTLYKTTATADSDKFK-ISQILTFNTLVLKATG-NINSGFWGAKYNV--S--IS--SQSN-DSVNVVDYAPNVKQESYAHKIMNNGWGPE-FLAGQNFIAQHMPLSSNFNPEFLSVLSHQDGAKKSKITVTYQ--R---EM-DLYNYKNFKTRTFKSTY-I- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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