Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | LVIVSLLHFYWAFGGKWGIDSVIPTTADHARRTFSPGKGGTIIVACLLACAGYILLAQSGYLSPVLSPSLIQWGCMVCAAVFVLRAVGDFNYIGFFKKVKNTKFARQDTALYTPLCLWLGISF |
1 | 5vjsA | 0.10 | 0.09 | 0.93 | 1.00 | DEthreader | | IQQLGRELLKGE--L-QGIKQLREASANEKKLQKLEDEEKHIELLETLQQTGQEAQQL----LQELLAQKIQQLLQKHQQLGAKILEDEEKHIELLETLGDRELLKGELQ-GIKQYRELQQQQ |
2 | 3rlbA | 0.09 | 0.09 | 0.97 | 1.04 | SPARKS-K | | IACIPILLLSLRRGLTAGLVGGLSMITGH----AYILSLSQAFLEYLVAPVSLGIAGLFRQKTAPLKLAPVLLGTFVAVLLKYFFHFIAGIIFWSQYAWKGWAYSLAVNGISGILTAIAAFVI |
3 | 3rkoB | 0.19 | 0.16 | 0.86 | 1.00 | CNFpred | | LMLLGGAVGKSAQLQTWLADAM-----------AGPTPVSALIHAATMVTAGVYLIARTHGLF-LMTPEVLHLVGIVGAVTLLLAGFAALVQTDIKRV-----LAYSTMSQIGYMFLALGVQA |
4 | 3kp9A | 0.09 | 0.08 | 0.87 | 1.17 | DEthreader | | AGLGSLLTAYLTYTKLTEQCSDLVL------SSRWAEIPTAAVGLLGFLGVLALAVL----P-LPLVKRWRWPALFGLVSAMTAFEMYMLYLM--VAVLR-QFC-MYCT-TAIILVAGLGLVT |
5 | 1cc1L | 0.01 | 0.01 | 0.95 | 1.00 | DEthreader | | FANYQSHILHFY-HL--AALDYVLLRIKDKATNYGLNYLKALEIRRICHEMVAMFGG--GMATE-IPTADKVAEYAARFKEVQKFVIEEYLPLYVKLLYIKIMGHVLRAEETWLTAVAVEKWL |
6 | 4he8F | 0.19 | 0.17 | 0.92 | 1.00 | CNFpred | | LAGLLLFLGAVGKSAQIPLMVWLPDA------MAGPTPVSALIHAATMVTAGVYLIARSSFLYSV-LPDVSYAIAVVGLLTAAYGALSAFGQTDIKKI---VAYSTISQLGYMFLAAGVGAYW |
7 | 3kp9A1 | 0.09 | 0.07 | 0.85 | 1.17 | DEthreader | | AGLGSLLTAYLTYTKL-E-SD-LVL------SSRWAEIPTAAVGLLGFLGVLALAVL----P-LPLVKRWRWPALFGLVSAMTAFEMYMLYLM--VAVLR-QFC-MYCT-TAIILVAGLGLVT |
8 | 5doqB | 0.06 | 0.06 | 0.92 | 0.61 | DisCoVER | | PLSWSVVLLSVTSVLYISAVFLTYYADAAGDARLLRRYALLWSGPTMLS-ALIIYQLR-------YHNPEHYDNLW-NVAWMLVISFLFFVITVWLLGQRRFGWAFIALLFQYAFAFYAYGI- |
9 | 6ohtA | 0.10 | 0.09 | 0.89 | 1.00 | DEthreader | | AGFIHVIEGWFVLYLSLWKYASRYI------LGDNFTV-CETITACLWGPLSLWVVIAFL---R-QHP-LRFILQLVVSVGQIYGDVLYFLTEH-GFELGHLYFWFYFVF-NALWLVLPGVLV |
10 | 6akfA | 0.14 | 0.14 | 1.00 | 0.64 | CEthreader | | AVLGWLCTIVCCALPMWRVSAFIGSSIITAQITWQAARALIVVSILLAAFGLLVALVGAQATNAVQDETAKAKITIVAGVLFLLAALLTLVAVSWSANTIIRGAGLYVGWAAAALQLLGGALL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|