Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | DKELMEKSEKLVKEGDIYWLKAFKDLEGDIKIGDGTVSMKDLKELDKKAGINTDNVMKNVKDGTELIGNWGFQGTDGFNMSLILKGDKTFETYGKGEYP |
1 | 4divA2 | 0.09 | 0.07 | 0.78 | 0.61 | DisCoVER | | --------------PEVKV-TSY-KN--AIGTETDFDSGPVFGGGTIYVPVDRQKVYVEMPKSYTLAGDIILI---DDGTLLVIKETQVLCFKMITKG- |
2 | 3fgwA | 0.10 | 0.09 | 0.92 | 1.00 | DEthreader | | GFEYEVYCEKLKNFLEANLEWMQREMELPDSPY-WHQRL-TLLQLKPFTIKPLGFLLLQISGD------LEDLEPALWVQCVERARLWVRFNSGPGMVV |
3 | 6mabA1 | 0.13 | 0.13 | 1.00 | 0.54 | CEthreader | | IQQYKKTLSSITSDLRENALFKAHTLQQDLVSIHKTVSKEQFCDVDICPPHLLLRPPLNLDPLPYGENFVSFCIGNTEMWGYIHSLDFRILTYEEKSII |
4 | 2gfgA | 0.10 | 0.09 | 0.95 | 0.65 | EigenThreader | | RKTLVETFKRLISQLDDFQLKKQAIFTFTLKQAGLLET--NQTLSKQEAKLALESADLSIPISQLTLSTSRAEIQGILCLDHSSY-LGIEDYEIEF--E |
5 | 2m4lA | 0.23 | 0.09 | 0.39 | 0.39 | HHpred | | ----------------------------------------------------------WTLNSNNIIGYWSTGIE-GTHKLLSFDEDGSFGIYSNAT-P |
6 | 1frtA | 0.19 | 0.12 | 0.63 | 0.55 | MRFsearch | | --WYWEKETTDLKSKEQLFLEAIRTLENQIN------------------------------GTFTLQGLLGCELDNSSLPTAVFALGEEFMRFN----- |
7 | 3h3hB | 0.04 | 0.04 | 0.93 | 0.42 | FFAS-3D | | EPITQAFAQQFSREWIDAWNAHLDAILSSGRLRGKEQVGAYWREALRIPDLHFE-WIATLAGVDSVAIHYRGAKGRLALEVFHFGPDRRVVKA------ |
8 | 5ts4A | 0.16 | 0.15 | 0.97 | 0.85 | SPARKS-K | | MSEEAKIAIELFKEAMKD-PERFKEMCSPIESNGQEYGSEECKKFAEEMKKTEVRVERYRSDGDRFEIELRVNKT--FRMEIRMRKNGEFRIEEMRLHG |
9 | 1ldpH | 0.12 | 0.08 | 0.69 | 0.50 | CNFpred | | GPEYWERITQIAKGQEQWFRVNLRTLLGYY--------NQSAGGT------------------HTLQWMYGCDVLLRGYEQFAYDG-CDYIALNE---- |
10 | 5xkxA | 0.10 | 0.09 | 0.92 | 1.00 | DEthreader | | TTEEQKLVDQFWNESLIYLDQYLKALETPT-GQCKDSA-CIMKYRDVE--LVAKHLKAVLAEPAKCFD-GWIPFYFYLYAEVGNL---RIKAEIARTAQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|