Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MEAYKMHDFINTNVESHQNETVFNLHICETNEFDVSLTKSTTLSFIVSKKNIKIVTKKWINSNQESMIGKSYIIPTKAFHYFLPIISETEDELNIQVQSFGLHGELLLNERLLIDKNNKHDAKITNFFETLDENVNKVLRGLQI |
1 | 6ohgA | 0.03 | 0.02 | 0.74 | 0.62 | DisCoVER | | CDFTQLK-PTESGP----------KVKKCEVKVKVKIICPLLYDNIEYVPKKSPYVVLTKEETKLKEKLLSISPNNFKEGVIEFTLPVHKATVFYFICDNSEDKKGNRGIVEVYVE-P-------------------------- |
2 | 3hemA | 0.08 | 0.06 | 0.74 | 0.83 | DEthreader | | EAVRSHYDKSNEFFKLWL-DPSMTY---------------------TLEEAQYRTMVIGLFDEPVDRIVSLGA---------EH---FTGRMLLHTIT-FILTEIFPGGRLPVDKVERYHR-I-GANYVPTLNAWADALQAHKC |
3 | 2aexA | 0.09 | 0.08 | 0.97 | 0.64 | CEthreader | | LLILETQAQVCQALAQVDGGANFSVDRWERKE-----GGGGISCVLQDGCKAGVSISVVHGKLPFCAMGVSSVIHPHAPTIHFNYRYFEVEWFGGGCDLTPTYLNVHFHRTLKEACDQHGPDLYPKFKKWCDDYFFIAHRGERR |
4 | 3uauA | 0.05 | 0.05 | 0.97 | 0.85 | EigenThreader | | NQTVKQEIASLSQCNADGDFIACLSLAKD----NNDEYQELFNIKIRSNESNLVFEDFKLGKLSSDSYTLSFDNSINYLDNLDIKFYN-AKLNFNTNLNINLKEILNNFKIDSTLEGVFSSYIATAKENLQTLKAQSNNITQND |
5 | 6ohgA | 0.13 | 0.09 | 0.71 | 0.28 | HHpred | | ------------DTAVS--EDSYKEYVCDFTQLKPTESGPKVKKCEVVNEPLIKVKIICPLKGVEKLYDNIEYVPKKSPYVVLTK--EETKLKEKLLSKL-IYGLLISPTV-NEKENNFK------------------------ |
6 | 6vftA | 0.07 | 0.05 | 0.67 | 0.57 | MRFsearch | | -------------------ICMIKVEIQDINDNAPSF-SSDQIEMDISEPGTRFPLTSAHDPDAGENGLRTYLLTRDDTKFPELVIQKAQNHHTLVLTALDGPRSATVQINVKVID---------------------------- |
7 | 6ka2A | 0.12 | 0.10 | 0.89 | 0.54 | FFAS-3D | | -DAEKYYNMYKEDVKKAVPHLCVDVKIISGDPTSS----GCIKEWNVNIDGKTIRSVEETTHDDETKTLRHRVFEGDVMKDFKKFD------TIMVVNPKPDGNGCVVTRSIEYEENSPTPFDYLQFGHQAIEDMNKYL----- |
8 | 6l30A3 | 0.13 | 0.12 | 0.91 | 0.72 | SPARKS-K | | TEAQKQIFDVVYEVDSSHRSLVQRVETISLGEHPCD--RGEQVTLFLFNDCLEIARKR----HPPASLKHIHLMPLSQIKKVLDIRETEDCHNAFALLVRPANVLLSFQMT------SDELPK-ENWLKMLCRHVANTICKADA |
9 | 4r04A | 0.07 | 0.05 | 0.70 | 0.78 | CNFpred | | ----------------------KSIIHYKK--------DSKNILEFYNDSTLEFNSKDFI------AEDINVFMKD-DINTITGKYYVDNTDKSIDFSISLVSKNQVKVNGLYLNE-----SVYSSYLDFVK-FMNLFLDNISF |
10 | 3lwtX | 0.04 | 0.03 | 0.80 | 0.83 | DEthreader | | ------------T--EE-TGRFYDLTNR---------ADEFFIYAKTVDALGLITRRSIFRAGYRGNFNETEQILLAEIHVFSFLQTRGSVLV--DFFHKVIVEIVNEQHSVVRTNDCRTNVVQSVLAQWVLQKEFESADV--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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