Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | QEIGWYEEANDFMIAQGLAEFVHTSLEYETWDLLTQSVALNYLIIKYRIGELTDRDIEIWDRVKFNEKCITDCKHLLSHKEVLEFTFFYMCKRAKSLSKEQLNSDMMSLAMYCNTFVYDLYTHDLLRKYRKCTDFLSYYGPSQAVLACQRAVLSQISDRLDPLKTTHVDDYLYVMKEMMEHMTIGVMDRYGHFIGKLLSYVPFFEMIQVPQHAYYCEELLYICKGIEYKEETLRNYIFIQLHDCLPSFFRLFLKNKRYATIHDILFYWCDDEQRMSLEKKYNLSFIYEKYA |
1 | 2o8sA | 0.04 | 0.02 | 0.60 | 0.59 | DisCoVER | | TSTYSY-DVARET--EYYREKIGSVKSIDDFADLYNYALKAHG--LEDAY-AKAFIRKVLTEGASDKNAF-AN-KLSDNRYAELAKS---L--DFAGGA--AA--TAEAAKGVIGNYARQTLEAGDDNNGVR--LA---------------------------------------------------------L--YF--ERKA--PTIKSGLDFLAQVFRTTFN-----LAAD-----QAALIEIKDL--Q----DPEKVGKLLE-RF---TIWEQ-------------- |
2 | 6hzeA | 0.08 | 0.06 | 0.77 | 0.83 | DEthreader | | ------EM-VLRGAC---Q--TY-AVYEYPYSF--------YL-MM--VENRM-NS-LYLLVIQMFYLLVCRAHHKYNSLTVHLANLEPPANYW------DWPYTAREEQVYRDWAWAYEESGEIAPKLLRGQTLLLG-MF--M--FV----GEKLEYHVGE----LPLDIIQVIEHGDKAVIQNDMHCYREYAYAFYYKVKAQVLYLAVME--Y--ARRIPIGGDDGNNKT-WSEMLVHYKAELYNFKEN--RKCV------------LESD--A--QAEPVLTNERDLD |
3 | 4gyoA | 0.06 | 0.06 | 0.97 | 0.84 | CEthreader | | SLMEFRHRIMLDKLMPVKPFSDMLNEIESNLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALEHARQLEEAYMIAAAYYNVGHCKYSL------GDYKEAEGYFKTAAAIFEEHNFQQAVQAVFSLTHI--YCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGLTECFDLLESRQLLADAEDLLHDTAERFNQLEYESAAFFYRRLMNIK |
4 | 5hiuA | 0.08 | 0.08 | 0.96 | 0.83 | EigenThreader | | --SPEQADLVAKLKNGHLSERVLAANKLRFAVVDFVHAIWHAAKDMIHPENARQASWELLIECVKYPVALEQLTNHGRMFPLLTLWLNQAYRAARDARKLAEDKNLSQLFALVKDVIKFNFKFAIAGLIDMLLKICMLTSVEDDLRACIHVIESLVTFGSI-----PTNKLKYCIQVLSSIHCLVEAWHTISIICRTVRILLDFLRSYSPDVRGALSVLQKLLRKPQVPLSLLVGGLANVSKSSSTRVATEIL------RLINSLFHEHWEPIFDVAAQCANVSLQLKHLI |
5 | 6ozuA | 0.15 | 0.09 | 0.58 | 0.27 | HHpred | | -------------TDKEIQDVIQVIFNDSIFPYYVKLVV--S--LINDIGEGEPAGR--FIRNAIIRQCQRTFENAEEAQAQLE-------REIANLPEEEAEQRRLGKQKANINFLGLLFTHGLVRELHVLEWLLYGTFPADYELIHFMNLLLTCGKSFSKEGQEFVPKFRAVLEELMHM---HPQRRMQFLLLNTVE-------------------------------------------------------------------------------------------- |
6 | 5i9dA | 0.14 | 0.13 | 0.94 | 0.58 | MRFsearch | | --VTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV--------EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYSTLIDGLCKA------GKLDEALKLFEEMVEKGIKPNVVTYSTLIDGLCKALKLFEMKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEEMKDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA- |
7 | 3sf4A | 0.11 | 0.10 | 0.90 | 0.79 | FFAS-3D | | -KSGDCRAGVSFFEASQLGNAYFYLHDYAKAEYHHHDLASGNLNTLKVLGNFDEAIVCCQRHLDISRE-LNDKVGEARALYNLGNVYHAKGKSFGGEFPEEVRDALQAAVDFYEGNLGNTHYLDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIF------LGEFETASEYYKKTLLLADRAVEAQSCYSLGNTYTLLQDYE-----KAIDYHLKHLAIAQELNDRIGEGRAC---------WSLGNAYTALGNHDQAMHFA------EKHLEISREVNLSDLQMV-- |
8 | 4gyoA | 0.13 | 0.13 | 0.98 | 0.76 | SPARKS-K | | EVAVKLNEWYKLIRAEALKQEIEYDLENQDLLLYFSLMEFRHRIMLDKLMP-VKPFSDMLNEIESNLTG--LLEYYFYYFRGMYEFKIDHYKHAEEK-LEYVEDE--IEKAEFLFKVAEVYYHFSMNYASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHELTHLCSALEHARQLYYNVGHCKYSLYKEAEGYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGMYLTKFRLIHELYLLNVLTECFDLLESRQLLADAEDLLHDTAEQLEHYESAAFFYLMNIKKKLA |
9 | 4hb4C | 0.09 | 0.08 | 0.91 | 0.94 | CNFpred | | --SETVKIIANIIKTVAVCTSMGADFYPQLGHIYYNMLQLYRAVSSMISAQVAAEGLIA-----TKTPKVRGLRTI--KKEILKLVETYISKAR---NLDDVVKVLVLLNAVLEDYMNNVPDARDAEVLNCMTTVVEKVGIPQGVILILQSVFECTLDMINK-YPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKH----NRDVEVNGLQIA------LDLVKNIERMGNVPFANEFHKNYFF----IFVSETFFVLTDSDHKSGFSKQALLMKLISLVY |
10 | 3m1iC2 | 0.04 | 0.03 | 0.90 | 1.00 | DEthreader | | ENRLLSDLMQL-P-----A--TI-EQSNLLDTVKIIANIIKTNVAVCTSMDFYPQLGHIYYNMLQLRAVSSMIAQKVRLRTIKKEILKLVEYISARNLDDVVKVLVEPLLNAVLEDYMNVPDARDAEVLNCMTTVVE-KVGHMIPGVILILSVFETLDMINKDFTEP-RVEFYKLLKVINEKSFAAFLELPPAFKLFVDACW------KNYFFIFVSETFFVLTHKSGF-SKQALLLMKLILKISVPLYTSN-QV-------YL-SQYLAN-MLSNAFPHLTSQQIGDDYF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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