Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MNLEKFDGMIDAVQRTTCMPINDKQQAAFKQKYDFEPTFEYGRDEDNHYVIRTSKKMLEEMEFYLALKYDREEIDLYMHAEIDGVCYVSVSYEKEALHLQELFQFLED |
1 | 4ev0A1 | 0.12 | 0.06 | 0.56 | 0.68 | DisCoVER | | A-Y--FQ-RR-LYP------------------------------QGKPIFYQGDL--G--QA--LYLVAS---GKVRFGEMSLGERSASAVAVE-DTELL-AL-FRY- |
2 | 1zchA | 0.06 | 0.05 | 0.81 | 0.83 | DEthreader | | --------RS-IR-SYTPVQLD-QIIEAVQSAPSQQVTVITVQKDQAPVFLLFCAVDAGILGTATAAESL----GLGTVPIGRPLSGLVIGHPADRS-AKK-PR---V |
3 | 4gyzA | 0.09 | 0.09 | 0.99 | 0.69 | CEthreader | | ERARGVCSCLALYSPVFLQEVIPPYCAYLKKRAA-SYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNTKRNLLCVNVSLGGNEFCLMTSHERIRQLKTVLGKMQE |
4 | 2adcA | 0.04 | 0.04 | 0.97 | 0.62 | EigenThreader | | RIAIPGLAGAGNSVLLVSNLVT---PQSLFILFGVYGDVQRVKNKKENALVQMADLAMSHLNEDLKVLFSSNGGVVKGFKFFQKDALIQMGEAVQALIDLHNHDLGEN |
5 | 2n93A | 0.11 | 0.08 | 0.79 | 0.31 | HHpred | | -KNENFEEYLAALG------VPQDSIKKAN---SPGVVYEIIVNG-NKFTFKSSSG--MNSTLIVNEEVEGTVMNIKSFTKLEGSKLVVNSELPDGRK---------- |
6 | 5l10A | 0.13 | 0.13 | 0.96 | 0.63 | MRFsearch | | --LTILHDCFDALQRAPTAEAAFPPIAAAAAALGFRYCVYGLRRARPDQIVGNH--PREWEHRYVKFCFGRYGWSHGGYDRAGNLGVLTLVRDTTPLDADEISRLRAP |
7 | 6pxyA1 | 0.21 | 0.20 | 0.95 | 0.44 | FFAS-3D | | --LSGRILLIENAAQNIAINPEPAAVASLLEQKALTSTFMYLGDATGHFTIRPDAKMPRVRPWYKGAESSSTSISIATAAKKAGQSVGVVG---GDLSLQTLINTLSA |
8 | 4nzrM2 | 0.15 | 0.12 | 0.82 | 0.60 | SPARKS-K | | IDANKLKQAVGDIYNYR--RFERQFQ---------------GYFAGGYYLVKNVNKDSDDDLVYRSLKELN--LHLEEAYREGDNTYYRVNYPGASIYENERASRDSE |
9 | 2qmaA | 0.14 | 0.13 | 0.92 | 0.72 | CNFpred | | VGPKALGDMYDHLLAQ-----TLEVADMIRTNDQFELLAEPS---LSTVLFRATHADLDELNKALRLEALTRGIAVLGETIVDGKTALKFTIL-TTSDFESLLSKINM |
10 | 1llwA1 | 0.03 | 0.03 | 0.85 | 0.83 | DEthreader | | ----F-A---GVMT--MVFLARAYVEEVVRL-EK-LTVLGWREVPVHIEQILVAGELDRRLYIARSIIGKKLAFYVCSFSCR---TIVMR-ANSSYNLDSALELLVRT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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