Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | PFVQVSLDEVRNAIRNFSEHLPKGTFRTILVNDDFTIDFSQLVPYLPGIPSQKFYMSKETYDVFDESEKEIPEIMDKVQKAVDHYFKDHKQYPTLSYDPLHRVNFFELIQGKYLDFNPELEFYITDYDGIISH |
1 | 3c5qA3 | 0.04 | 0.03 | 0.68 | 0.68 | DisCoVER | | LNVARIS-IR--IN--P-------N----IDAKTSTGLKENGVGEMFFLEPVSVHF----HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDL---RFFDVG------------------GGIGVLTIICEP- |
2 | 4he8L | 0.06 | 0.05 | 0.83 | 0.83 | DEthreader | | TIPVLFLIHVYAIYMFLIGFWYADSKALVWLPDAMAG----V------L--AATMVTAGV-----TDIKIVAYSTISQLGYMFLAAGVGAYVALF----VFTHSGFSKDLYVGALAVTAAWF--MLNHLAGSV |
3 | 4akrA | 0.06 | 0.06 | 1.00 | 0.72 | CEthreader | | PSESLLNASAGSTFREYNTSQSVQTSKGSALITKEGEISNNEYLDPKNKQVITYDHIKQEVTGERSIEQDIEQYRAAFDEEATKYCNEYSAVYGTKVSEGIKITVCISTCIYKPNARSVWTCTFKPGSGNVTS |
4 | 5fmgA | 0.01 | 0.01 | 0.88 | 0.68 | EigenThreader | | CSMVGMPGDCLSMVYKARSEASEFLYSNGYNV-NAETLCRNICDKIQMRLHACSG---MIIGFKFDPSGFCAGYRQESISVLERLL----EKRDIR---NTTILAIEAL---QTIEIE--VAIVSTKNRNFTQ |
5 | 5eybA | 0.11 | 0.10 | 0.89 | 0.31 | HHpred | | RWTAEHWDYLERRMQNFCQTLDTQVLHEKRLHGPLSSLVKLLVQEMPSFTRRTILRHRALYNIPGYRGDFGVQETAIISQEVHNFIMDQGWSEYQKCPKTIRMFYSNLYKK--LSHRDAKS------------ |
6 | 2mzeA | 0.09 | 0.08 | 0.86 | 0.57 | MRFsearch | | --ETKNANSLEAKLKEMQKFFG--------LPITGMLNSRVIEIMQKPRNSPKWTSKVVTYRIVSYTDLPHITVDRLVSKALNMWGKEI-PLHFRKGTADIMIGFARGA--------HGDSYPFDGPGNTLAH |
7 | 6raw41 | 0.10 | 0.08 | 0.75 | 0.44 | FFAS-3D | | --TNVVVSQCKSKFKSFIMRFIDPSAEQDEIDVNQPLYLQKLEEIHT-LEEPYLNLNCAHLKTFDQDLCYPQEVIPGFDMAINEMFFERYPAALLEHQIQVRP------------------------------ |
8 | 5cqcA2 | 0.15 | 0.10 | 0.64 | 0.60 | SPARKS-K | | ----VQLSEFIVALEDYGKLRSQQ-------YSKKLTAVELLIGILNDIKGKNE---------ISESQVKEVDCLMSLGKLVQFHLKNLGA-------ES----LQKLVLPCVKFD----------------- |
9 | 4tvsA | 0.06 | 0.04 | 0.66 | 0.47 | CNFpred | | --ETTAVQEFQNQMNQLKNKYQGQDE----------KLWKRSQTFLEKHLNSSHPRQPAILLLTAAR--DAEEALRCLSEQIADAYSSF-------SVRAIRIDGTDKA------------------------ |
10 | 6gy0A | 0.03 | 0.02 | 0.85 | 0.83 | DEthreader | | GHKVLMQGEALSKLKALNDFVSSTKP-----------H--MRYMEALSHLQTLLSAGNVGIIFKNDDLRQDMLTLQMIQLMDVLWKQEGLDLRM-LLLAEFSCGYCVATY----VLGIGRNIMIRES-Q-FHI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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