Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MVYHLEDGKTIQDIKEFYYRDHNKMLERVKHHVTDNQNVTAIDPQGTLISIACDDIVKVELNYL |
1 | 5uhjA2 | 0.06 | 0.05 | 0.78 | 0.55 | DisCoVER | | RFTIQLVTEDIKAT--HEELVRRGVN--FTRAPEQPANASFQD-PDGNEFL-----LLQP---- |
2 | 6wimA | 0.08 | 0.08 | 0.95 | 1.00 | DEthreader | | QIRALPARTKMPGMEG--KVLNLRDIEQGMEQINRREPVQIEISPSVVTLTALPE-NGLAPYYT |
3 | 6dtmA2 | 0.10 | 0.09 | 0.97 | 0.61 | CEthreader | | KVLLSANKSLQDKPIAEIYKSVPKATNEVLTILENGSKATLEYHKENFLAVETFKALIIEKD-- |
4 | 5edfA | 0.06 | 0.06 | 1.00 | 0.63 | EigenThreader | | PTGVTTKVIPYGYKAHFIQFLRDGLDSRLLTYSAYPEYEAYDKYFHEFYYIKKNPAIITHRNNR |
5 | 2ofcA | 0.21 | 0.19 | 0.89 | 0.25 | HHpred | | IVTNLAADETGMVINQQYYSQKN----REEARERQLSNYEVKNAKGRNFEIVYTEALHANL--- |
6 | 4cbvA | 0.15 | 0.12 | 0.84 | 0.53 | MRFsearch | | ---------VDKDINDEFKKRIEQNIFYTKSLLENEVDYFDYNYKGNDLKIPYHDILYIETTG- |
7 | 2ltfA | 0.24 | 0.19 | 0.80 | 0.38 | FFAS-3D | | MKTFALQGDTLDAICVRYYGRTEGVVETVLAANPGLAELGAVLPHGTAVEL------------- |
8 | 3d79A1 | 0.13 | 0.12 | 0.95 | 0.76 | SPARKS-K | | IKHPLSK-KDVKEIIAQLSQMFGE--EIARKMLNKKDEVKVAEFDKTTEIILVNDKPMFIRRKD |
9 | 4hqjA | 0.22 | 0.17 | 0.78 | 0.47 | CNFpred | | -----------GCFSYYQEAKSSKIMESFKNMV--PQQALVIR-NGEKMSINAEEVVVGDLVEV |
10 | 6p3qA | 0.12 | 0.11 | 0.94 | 0.83 | DEthreader | | -WATALVDSEPIDLTEGDFDKRNQLFERMLKVHSRGGLISASIKKGHAYAVTDVIRFVIIK--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|