Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | NDKDEVVKKINMSIPVKIEISNERWGEYVFEDENSIQKIWNSINEITRDSSIEENSDAEVSDIEIDGNIYYLNGMKDTFEISNKLSLNNNVYNDSYKIPLINSLKNKLLGYLYSTSNIVKIMNYNNKMTIINSNSQIKELNKSDKESIKNIISNSIKIENNKEIISLLKDKKEALSHIKIYLDNDTGTLSKVKCCNVVNIDVYDNDFFVVQYMGDENGRHIYFRGKLNDACR |
1 | 5aihA | 0.10 | 0.04 | 0.45 | 0.70 | DisCoVER | | --------MT-PLTVQLFLAR--------------VNA-L-----------------------DLDGACALLAE--D---------------------------------VVY----D--------------------------------NV--PMTVHGRAAARAFLSQLPAAIDWEAIAATG------DAARGTVLTTDRFTAIRVMGAFDVADGSITAWRDYFDLGQF- |
2 | 2h3wA | 0.04 | 0.03 | 0.75 | 0.67 | DEthreader | | ---RQPVVIYSSPGVILPKQQLRFAAKL------------Y--IL-SCRVPGPNAYNVQKSFTVCLDQVVSDDVYRHVGQM--HGGGSKFNSGIKAKQNLSIMIQDL-DIMMLFIALQLAYYQACATYESASRLGRTDTIRSQAHRAYT------------------------------D---DTSYAIA-MHFNLSTAQVPA-KTDCVGFFGPVPDGYGICYNPMEAHIL- |
3 | 5kecD | 0.08 | 0.07 | 0.87 | 0.61 | CEthreader | | -----EGTIKTSKYEIIAIFREELRKRTEIEIFFNNTSIITQLTRVDFAEFHIQTHRKIPSGHKIRFLLHS-DSGKIEFNAALTKHDNKGIRYAFSLPECLQVVQRRRDPRFRLRHEHDFYCRGRHK------------NGENYLFDIKDISDGGCALMTKTPNLKFLSHNALLKNAVLMLAEYG-------------EITIDLVVKNVIVITLDESESYYQISCQFKFRHL |
4 | 1zt4C | 0.06 | 0.05 | 0.75 | 0.63 | EigenThreader | | -----------PQRLFPLRCLQISWGLAWLGLQHIFRVYRSSFTRDVKEFAKMLRLSYPLELQVSAGCEVHPGNASNNFFHVGLSFQGTSWPTQEAPQVLNQDTRETVQWLLNGTCPQFVSGLL-------------------ESGKSELKK-------------------QVKPKAWLSRGPSPGPGR------LLLVCHVSGPVWVKWRATLDVAGLSCRVKHSS----L |
5 | 3fyfB | 0.10 | 0.06 | 0.57 | 0.29 | HHpred | | ---------------------------------QQDSVSYVQAINALKNGSFVLEA---DNVVFRNGIMRFVSSNTNYVEVNGQGIIQ-TAFTNFV------------------Y-------N--GGVTVQ-GN-----------------------VNGISM----RQ-DKDGNVYYNYGING------IA-VSATVSIVLTGTNQASVTINPNFSGNTLTMNGYLVPYNE |
6 | 2xp1A | 0.12 | 0.07 | 0.63 | 0.60 | MRFsearch | | --VTESENYLRSS-TDDFLIRKGS------------------------------------RHGYCVLVIKFASDVFVHMKIEEHYTCSNKHFED--IDEVISVYVRPILR------------------------------------NLKSIKAHAKYFNSPEDAEKLLSSFDGSKVVYAFYFSR--------KYPGKLTFAYNN-GSILEEYIGVSDMLTYNTFKDIDSFVA |
7 | 5kzfA3 | 0.14 | 0.09 | 0.64 | 0.55 | FFAS-3D | | -DAEDIYSKYTEFLPVHADDLAEFDG----DRSACIKAMIEVVDRMYAEIDDNR-----------FLEVTYANGDKEVMYFKDFN-----------SGAMIQNVVDRAKKNA-----IKSVLETGQP-----------GLRIQHLDSIVDEFAENEDLTNPDDWARISGKKGERIVYIRTLVTGKSSSASR----------------------------------------- |
8 | 6yroD | 0.09 | 0.07 | 0.79 | 0.53 | SPARKS-K | | -------------------QQSPLI--QTSNADYKSGKDQEKLRTSVSINLLKAEEG------QIQWKVTFDTSVKHYFILPNGLDLTKIVDNNQHD----------ITASFPTDINDYRNSGQEKYRFFSSKQGLDNENG------FNSQWNWSGQANPSETVNSWKSGNRLSKIYFIDQITDTT------ELTYTLTAKVTEQSFPLLAVMNSKSTEVTSLGAREITLEK |
9 | 6d47A | 0.10 | 0.08 | 0.77 | 0.59 | CNFpred | | -------------------------LKFRLVR-ESFADAVSWVAKNLPTRPAVP-----LSGVLLTGGLTISGFVSAEVRVPAEIASPGTVLVS---GRLLSDITRALPNK------PVDFYVDGNRVALTCGNFSLPTMAVEDYPTLPTLPEDTGTLP-AELFSEAIGQ-LPMLTGIRVEIS-----------GEKVVLAATDRFRLAVRELTW-IEAAVLVPAKLGEAAK |
10 | 6kptA | 0.04 | 0.03 | 0.68 | 0.83 | DEthreader | | -----------FDG-D------------PAAYYAMGPGMSEIFYNNGTDE---------VGAGKRITADSDDLFENIMHLVLSLFVPNAVGWLVHNGIAQMFDVIEQARMMVGT-KAIATLSTGYN------------VRSLMTQKAYAEGLRAIYTVNDLQALAYVAGEEIATALDV-------------LGSVRLMAGDLLSGWLLA---------------KIAASFFN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|