Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MNPNAKVDWIGTPKPYIYKDDVTYDATAIDFSLEKDDNRYKLIVLKHEQSVQYKFVQYGTKPGSQKPFPIDIPFQDEMFPLVERILQDPYVQA |
1 | 6f1kA | 0.05 | 0.04 | 0.83 | 1.00 | DEthreader | | -------------KAPVPTKVGKAHVYDVMLNQTNNNKYYLIQLLEDQRNFSVWMRWGRVG--KMGQHSLVACNLNKAKEIFQKKFLD-KTKK |
2 | 2eocA | 0.11 | 0.09 | 0.80 | 0.65 | DisCoVER | | PGTQVYEDYNCTL-NQTNIENNNNKFYIIQLLQDSNRFFTCWNRWGRVGEVGQSKINHFTRAKSHPGKYTLIEVQ------------------ |
3 | 4atoA | 0.08 | 0.06 | 0.84 | 0.83 | DEthreader | | -D-NPKFHTISNDEQHS----------RPYVGVLEKGHDYFVPLTSRNDKRIGVLLVMIPVP---KECKEIDIGNLKQYLFLKENMDRVTKVV |
4 | 6mjpC | 0.10 | 0.10 | 1.00 | 0.56 | CEthreader | | AKSGNTLFKAPILKVYREGTLQEWEITARRGILSKDQVLTLYVLAKNLLTLTTSEMSIQLKSRDFWADKPVELRGPQFETHGQAMKGNFADHS |
5 | 5vtgA | 0.03 | 0.03 | 0.92 | 0.67 | EigenThreader | | -PNLDPGLKARLTGDLNVVQGLGLNGINIGRFHAYGQDLIVGELFSGPPQPYLNIEAIRNPDDVIAGVRVTG-LADEPKAEIFSD-----PAM |
6 | 6qp7A | 0.18 | 0.15 | 0.84 | 0.30 | HHpred | | -----MDKAVNHNNPVYYKRDLVFTKLVVDKIRIDINQEYIVYYVGTNLGRIYKIVQYYRNG-ESLSKLLDIVAPNE--AIQVMEI------- |
7 | 6qp7A | 0.25 | 0.12 | 0.47 | 0.65 | MRFsearch | | --------------PVYYKRDLVFTKLVVDKIRIDINQEYIVYYVGTNLGRIYKIVQY----------------------------------- |
8 | 2eocA | 0.15 | 0.14 | 0.91 | 0.38 | FFAS-3D | | EKRIIRVDLSSNPGTQVYED---YNCTLNQTNIENNNNKYIIQLLQDSNRFFTCWNRWGRVGEVGQSKINHFTRLEDAKKDFEKKFRE----- |
9 | 6f1kA | 0.13 | 0.12 | 0.90 | 0.62 | SPARKS-K | | ---KAPVDPECTAKVHVYCENDVY---DVMLNQTNNNKYYLIQLLEDDAQRNFSVWMRWGRVGKMVACSGNL---NKAKEIFQKKFLDKTKNN |
10 | 3wt0A | 0.15 | 0.10 | 0.66 | 0.58 | CNFpred | | -------------------------YVSIDIGS----SSVKTIVGEKF-HNGINVIGTGQTYTS--IKNGLIDDFDIARQAIKDTIKKASIAS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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