>PF13039 (253 residues) DFTIQYLSFFVINVEGQGEQANKTYKHYQTLDHTSYENHALKDFLDGELMKVAKRKVEQN PKSEQVPTKIGRFVVEPGYDLDTNPNYNQFNRIRLAETSEDFKRHSEQLVHAYMDTSAIR GGALLVIRAKLNKYMDDPFVFVLKCDFEQKVASITDEKTLIHHVNRAITTKNMKSIQYPY MPEEGMVEEWELKVHQSSHARYFEDFLKFVEYNKSMPELVKHQMIEMAQQHIADTYQEAS PEREQEEEFIEAW |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | DFTIQYLSFFVINVEGQGEQANKTYKHYQTLDHTSYENHALKDFLDGELMKVAKRKVEQNPKSEQVPTKIGRFVVEPGYDLDTNPNYNQFNRIRLAETSEDFKRHSEQLVHAYMDTSAIRGGALLVIRAKLNKYMDDPFVFVLKCDFEQKVASITDEKTLIHHVNRAITTKNMKSIQYPYMPEEGMVEEWELKVHQSSHARYFEDFLKFVEYNKSMPELVKHQMIEMAQQHIADTYQEASPEREQEEEFIEAW | |||||||||||||||||||
1 | 3qjjA | 0.07 | 0.05 | 0.71 | 0.68 | DisCoVER | -HHHHMRIEVKLLPL-----KDNPILPFNYIIAKLLSSPHG--FW--TF--S---RI-IVRKRKI-L---PDKGIEILSDD---VSL-YI--SS--SNEDIIRAIAEAVEKSPIGELSFLVGDIKAIKVKELGKEN-VFSTLSPIVVRHWDLYPDRDFTIEVLKFKPTRLYIRGSLMVFRYAGSEIARFGYENGFGEKTGLGF--G--MV-------------K--L---I---------------------- | |||||||||||||
2 | 7a23I | 0.04 | 0.02 | 0.67 | 0.67 | DEthreader | --------------------------------WNLFRRDNFTYFCQIFLLLSTAGTISCFIVLLLSTCGMLQSCFYVIATGLLILGAFSSGILLFGCIILFIAVGFLFKTPFHMWAPDIYTASPKIFILFIY--YGAQQIF------------IASMILGALAAMLLAYSS-GHVYICFSCGT--------GSYAGLAGFC-S-------------KFYLFFAALGAYFL---------------VGVVTSVI | |||||||||||||
3 | 1vt4I3 | 0.03 | 0.03 | 1.00 | 0.54 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 6r3qA | 0.05 | 0.04 | 0.89 | 0.68 | EigenThreader | RPFEEVSILFADIVGCEKISTLGDCYYCVAGCP--EPRADHAYCCIEMGLGMIRAIEQFCQEKKEMVNMRVGVHILGMRRFKFDVWS-----------------NDVNLANLMEQL-GVAGKVHISEDG---KVTELKT--YLIAGQVVQYCNFCQLSSWMRSSLATVVGAGPLLLLLYVSA---SLIGQEVILVFFLLLLLVWFLNREFEVSYRLHYHGDVEADLHRTKIQSMRDQADWLLRNIIECYRVLN | |||||||||||||
5 | 2pffB | 0.20 | 0.12 | 0.60 | 0.47 | HHpred | -------------------LENNEGVPSPMLSISNLTQEQVQDYVN-----KTNS---HLPAGKQVEIS----LVNGAKNLVSGPPQSLYGTLRKAKAP------------SGLDQSRI-----PFSERKLK--FSNRFLPVASPFHSHLLVPASD---LINKDVKNNVSFNAKDIQIPVYD---TFDGSDLRVLSGSISERIVDCIRL-------------------------------------------- | |||||||||||||
6 | 3fxkA | 0.10 | 0.08 | 0.77 | 0.42 | MRFsearch | ---GNGLRYGLSSMQGWRVEMEDAHTAVIGLPS--------------------------------GLESWSFFAVYDGSQVAKYCCEHLLDHITNNGIRTGFLEIDEHMRVMSEKKHGASGSTAVGVLISPQHTYFISRGLLCRN---RKVHFFTQDHKPSNPLEKERIQNEVHDIER---------EDDQFIILNEELCDFVRSRLEV-----------TDDLEKVCNEVVDTCLYKVSPEAVKKEAELDKY | |||||||||||||
7 | 4whjA1 | 0.13 | 0.11 | 0.87 | 0.51 | FFAS-3D | ---------LVLKLKKQPCEAWAGRISYRNTELELQDPGQVEKEIHKAQNVMA-------GNGRGISHELISLEITS----PEVPDLTIID--LPGITPRDIGLQIKALIKKYIQRQQT--INLVVVPCNVDHEVDDRTIGILKPD-------LMDRGTEKSVMNVVRNLTYPLKKGYMIRGQQEITNRLSLAEATKKEITFFQTFRVLLEEGSRLAERLTTELIMHIQKSLPLLEGQIRESHQKATEELR-- | |||||||||||||
8 | 6defA | 0.11 | 0.09 | 0.89 | 0.51 | SPARKS-K | IVTRRPLVLQLINRQSSDTDKAANLDEWGEFLHLPGQKFYDFNKIRDEINRETEAKVGRNAGISPAPINLRIYSPHPGLTRVPVG-----------DQPRDIERQIRDMILKYIQKPNA---IILAVTAEVDPEGQRTIGVLTKVDMDEG-----------TDVVDILAGRIIPYVPVVNRGQRDIDNKKPI----TAALEAEKAFFENHKAAYCGTPYLARKLNLILMMHIKQTLPDIKQRISSSLQKYQQE | |||||||||||||
9 | 3en9A | 0.08 | 0.07 | 0.86 | 0.59 | CNFpred | EGTAEKTGVGIVTSD-----GEVLFNKTIMYKPP---PREAADHHAETFPKLIKEAFEVVDKNE---IDLIAFSQGPGLGPSLRVTATVARTLSLTKPIIGVNHCIAHIEIGKLTTE-AEDPLTLYVSG-------GNTQVIAYVS--KKYRVFGETIAVGNCLDQFARY---VNLPHPGGPY-LVDLPYTVKGMDIAFSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTE-----------ITERALAHT | |||||||||||||
10 | 5vfbA | 0.05 | 0.04 | 0.69 | 0.67 | DEthreader | -----------DEIAR----M------------------LN-NAWGSLYDALYGTVISEEGGAVRDKVAFARAFL-------DEAAPLESHATSYSVGDAAKPQAVL-LK--H-----NG-LHFEIQIDSPVGQTDAGVKDVLMEAALTTIMNWLMKGDLTMNRSPSPTAATLHA-------------------LHYHVDVF----------VGCSKVMEDRATLRISSQLLANWLRGSQEQVVESLKRMAVV | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |