Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | LATFNICSYLVAIVCMALLNLTFVIGAFQQKQYTSFVIALVMSFSFSIVAIVLY |
1 | 6zpjA | 0.07 | 0.07 | 1.00 | 1.67 | DEthreader | | AAKDRHALEMEETRHAYNAVIHRKDEVQEEALRQLLKSRQLMVSAARYEAVVAA |
2 | 2pg0A2 | 0.06 | 0.06 | 0.93 | 1.17 | DEthreader | | L-QE-LVVAIAAQTAAEVMFSLT-KV-KQRVEVQFRLAEMATEIALGRTFVDRV |
3 | 4p6vC1 | 0.00 | 0.00 | 0.09 | 0.67 | DisCoVER | | ----------------------------VAGIE--------------------- |
4 | 1l2pA | 0.06 | 0.06 | 1.00 | 1.50 | DEthreader | | KKAKAEAQVIIEQANKRRSQILDEAKAEAEQERTKIVAQAQAEIEAERKRAREE |
5 | 3mktA2 | 0.09 | 0.09 | 1.00 | 0.49 | CEthreader | | DMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALM |
6 | 6ly9N | 0.11 | 0.11 | 1.00 | 0.42 | EigenThreader | | TANLLILLSVAFGVVLVFFGLALRAYLGLKHRHMAHFWEGVGYLGGLVGVLALA |
7 | 2jlnA | 0.06 | 0.06 | 0.94 | 0.22 | HHpred | | ---TGFTNLPLWIVIFGAIQVVTTFYGITFIRWMNVFASPVLLAMGVYMVYLML |
8 | 6dz7B2 | 0.13 | 0.13 | 0.96 | 0.22 | MRFsearch | | --FALLAAVALGAIIATCFAIEIFISEVYLKGYLVFIPTILVSALIPTMSAVLL |
9 | 5v6pA2 | 0.20 | 0.19 | 0.93 | 0.48 | FFAS-3D | | ---SRFSFNLVLLAVVDYQIITRCISSIYTNQKESTSLYLIQVMEFTMLLIDL- |
10 | 3dl8C | 0.11 | 0.07 | 0.65 | 0.81 | SPARKS-K | | -----KATISVIIFSLAIGVYLWILDLTFTKIISFILSLR-------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|