Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | MIVNATPTGWEVIYHRSHALLAAQIAGQWQRKNAPARIYETLAAISHHDDLEKEWEENNLTQAGAPMDFMMNKEASVEKLASLIKNARYRGRWVTLLISMHISRLTEPKRGQSAELDAFLDEQIENQRRWREELGIEKDEVDAAYAFMQWCDRLSLILCQKELPADERFLEISKGPDGQRYDIMQRSDNLVTVKPWPFEDDKFTVNVEACDLQQ |
1 | 3tm8A2 | 0.07 | 0.05 | 0.70 | 1.07 | DisCoVER | | -NTDK--------TISHHGVTVSTLSIALAKLGITKKTQLLTLGALLHDYGHHHSP-L-----NLNQPLDEDLALWKKHPIEGAQKVQHFDQTVINIIGQHEETIN----GTG-PK--GL--REKDM-------------D-PLAVLVSSANAMDRLITFEGVPKAEAAKKLVGKH--PLQHIQ------------HLN--DI-L--------- |
2 | 4s1bA | 0.08 | 0.06 | 0.72 | 0.83 | DEthreader | | -----------APGTYHHSMMVANLAEACADKIGA-NSLLVRVGCFYHDIGKTLRPPYFV---INPHD--PSRDIILSHTKDGAEILKHMPQPIIDIALQHHGTTLLKVKEAD--YR-YS--GP--K---P------Q--T-KEIAIINISDSVEAAVR--SSTEPTKTEIDIKFTIIKIRDT---------LIA--T--LNGIYH-------- |
3 | 3tm8A2 | 0.09 | 0.07 | 0.77 | 0.75 | CEthreader | | -----NTDKTISHHGVTVSTLSIALAQKLGI-TDPKKTQLLTLGALLHDYGHHHSPLNLNQPLDSMS--PEDLALWKKHPIEGAQKVKHFDQTVINIIGQHEET-----------------------INGTGPKGLREKDMDPLAVLVSSANAMDRLITFEGVPKAEAAK-------------KLMIDHVGKHPLQHIQHLNDILKGL------ |
4 | 3tm8A2 | 0.08 | 0.05 | 0.68 | 0.75 | EigenThreader | | -N----TDKT----ISHHGVTVSTLSIALAQKLGITKTQLLTLGALLHD--------YGHHHSPLNLNQPEDLALWKKHPIEGAQKVQDFDQTVINIIGQHE---ETINGTGPKGLR------------------EKD--MDPLAVLVSSANAMDRLITFEGVPKAEAAKHPLQHIQHLNDILK--GL-------------------------- |
5 | 4bwcA | 0.12 | 0.07 | 0.61 | 0.29 | HHpred | | --WMPTEKTIQVKNV------LDRKGDAYGF------YNN-----SVKTTGWGILEKAG--YG-----SQSLSN-EIIMFAAGFLE----GYLTAPHMDDHFTNLYPQLIKMLNKVQDFLTKQDQWTRENIKYYKSDPFWRHADYVMAQMFAGATKRAVLE----------------------------------------------------- |
6 | 3hc1A1 | 0.14 | 0.07 | 0.54 | 0.47 | MRFsearch | | ---------LNRSTLWAHSLGVARIAKLIAERTGFLNPVNVYVAGLLHDVGEVFIN-----------------FFRGKEFSQVVTLVDEEKIT-----------------FGQAEERLFGTSHCEVGFALAKRWSLNEFICDTAIVAVAFADEYCTLRR------------------------------------------------------- |
7 | 3edvA1 | 0.10 | 0.06 | 0.58 | 0.62 | FFAS-3D | | -----------------HMRH--RLFQ------LNREVDDLEQ--------WIAEREVVAGSHELGQDYEH-VTMLQERFREFARDTGNIGQERVDTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEIF-------------------------------------------------------- |
8 | 5cwqA | 0.09 | 0.09 | 0.96 | 0.79 | SPARKS-K | | -----EELERESEEAERRLQEARKRSEEARERG---DLKELAEALIEEARAVQELARVRGN-SEEAERASEKAQRVLEEARKVSEEAREQGALALIAIALAVLALAECCRGNSEEAERASEKAQRVLEEARKVSEEDDEVLALALIAIALAVLALAEVACCRGNKEEAERAYEDARRVEEEARKVKESAEEQGDSEVKRLAEEAEQLAREARRH |
9 | 6ax9A | 0.11 | 0.07 | 0.61 | 0.54 | CNFpred | | -----------------DGLCYTDLMAGYY----LGAPDEVLQAIADYSAWNFVWDDRHD------RDIVHGRAGAWRRLRGLLHTALDS-DTLVAGFADSVRRLYAFL--FARHFHTVIEAYDREFHNRTRGIVPGVEEYLELRRLTFAHWIWTDLLEPS----------------------------------------------------- |
10 | 4s1bA | 0.09 | 0.07 | 0.74 | 0.83 | DEthreader | | ------------PGTYHHSMMVANLAEACADKIGA-NSLLVRVGCFYHDIGKTLRPPYFV--QINPHD-TPSRDIILSHTKDGAEILKHMPQPIIDIALQHHGTTLLKFYVKEADYR-YS--GP--KP---------Q--T-KEIAIINISDSVEAAVRSSTEPTAKITIDIFFITEIKIRDT---------LIATL---NGIY---------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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