Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | MRAIGFSELKDRKELQNLITDIIVNADERTYTSKDDDTILAEFCKDFAENIGIAVCGEFDSEDKFSFDYYYPYLRGSEISSEEDVSVERHAGTESYAGICDDIKVGVSLIFYLQNMIPYVKAHNSKKLPVIGTTVTLSALSLQGKIMMPIIKNEKDKKKIKKVSNNRNSLIAAARKGDEEAIESLTLEDMDTYTVISKKIQKEDVFTLVDTYFMPYGVECDHYSILGEILDCNKVTNKITSEVIYQMTVNCNDLVFSICINEKDLYGEPQVGRRFKGSIWMQG |
1 | 5m86A1 | 0.07 | 0.03 | 0.42 | 0.71 | DisCoVER | | FDSQAILA---------G--RF------DLTVINEKYDLFYLLPTINEKKIVSFYIFLQIPE--GIWKIYLDTES------------------FKLSEPFSTFFGIDSIVFDG--SK--GG--E----------LLPVRFISKD-----------------------------------------------------------------KDALSIDSAGYGE---------------NIYLR-Y-------------IGQN--K--------------GFSI- |
2 | 6rc9A | 0.07 | 0.05 | 0.69 | 0.67 | DEthreader | | ---LGLPQQRKSVQLKDDFGTAPWRPATRTPWNHHGLWTGFNPHPE----GQTVADNETFDNKDKS------HTAPLATI----TAVPRLLYD-VQGLQLFT----------------WSNKADFV-NNARAQLR--------VNRSGS--D--SNK-FQ--AT-DQKWDLDQTK-N---LPAYEGLLNPALVETGNTRAGSNSSPGIGFKIP------DSKATLITPGLAPRD-------NALPEHP-------NALAF---KN-DPNQVRTKL-------- |
3 | 3amtA | 0.10 | 0.09 | 0.92 | 0.52 | CEthreader | | AVSFLVEVDDVGELVDVVNEVIIE------HALDDEKTNPGAVFVDEELAVKLKPFADKAIKDVLQIDEALFVIGKYFIPHLRHK--------KGRGLIGALAAVGAELEDFTLELIAYRYPERFGTEREYDEESFFDDYELYPQTFDNVDWCNDVVVCIPNTPCPVLYGIRGESVEALYKAESVKTEPVD--RRIFVTNHATDHLIGEEEVHRLE--NYRSYRLRGRVTLEPYDI----EGGHVFFEIDTKFGSVKCAAQFRNVIRLLRKGDVVEVYGSKKD |
4 | 4aidA | 0.04 | 0.03 | 0.80 | 0.80 | EigenThreader | | QDPMFDTIEG---------------KTLVLETGARQADGAVLATMG----ETVVLATAVFAKNEVQVVVTVLQH---DFMGPIGAARVGWVDSKMDLVVAGTADAVMMVESEIQELSEEIVLGGVNFAHQQM---------------------QAVIDAIIDLAEHAADIAAAYKIQKKQDRYEAVGAAKKKAIAELEADVVRRGILDTGLRIDGRDVKT-------VRPILGEVGILPRTHGSALFTRG--ETQAIVVATLGT-----GDDEQFIDALYNFP |
5 | 3anwB | 0.17 | 0.06 | 0.36 | 0.29 | HHpred | | ---------------------------------------------------------------------------------------------------FGDWKSGDIVVVEIVDEIGEIDKVIAE----ERESEPLTLLPEGAEFYAYYLENYTKLRKLRLKLIRFNKILKAVMLNSLELLSRLAPEERRIYLQMSKIRNEGD------------------------------------------------------------------------------- |
6 | 6n67A1 | 0.13 | 0.09 | 0.70 | 0.83 | MRFsearch | | ----------DPQETAALVRALDDAAFSVKKTRYAVGAEVDSWRFNDWPDLPTYARGLFTTVPEIAVRGYDKFFNIDRERTKGPYELTLKE---------------------------------------NGCIIFISGLE-DGTLLVCSDRSDVALSHSSAGEKHLEAQLERIG---------------KTKEELARELRK------------------RNATAVAELCDDSILAYGPDKAGLYLHGINLNKTGLIIIDNIDDVKAFAHDGRDVEGFVIRC- |
7 | 3e8wA | 0.07 | 0.05 | 0.68 | 0.45 | FFAS-3D | | VLPVEKCNLEDSACMTSAFQQALPTFDDFAFDLSGLQFTLKEGKLKGLKGAVIDNVKWDLKKKNIEVDFHLDATVKGHYTAGGRILILPITGDGQMKLKLKNIHIHLVVSYEMEK------------DAEGVDHVIFKKYDVKDNAQFGLTNLFNGNKELSDTNQNWKQVSEEFG---KPVMEAAAKKIFKNIKHFLAKVPIAEIANV--------------------------------------------------------------------------- |
8 | 4r04A | 0.14 | 0.12 | 0.83 | 0.72 | SPARKS-K | | IIEINLVAKSDKNYLISNLSNTIEKIKNIAYNYTDESNNKYFGAISKTSQ---KSIIHYKKDSKNILEFYNDLEFNSKDFIAEDINVFMKDDINTITGKYYNTDKSIDFSISLV----------------SKNQVKVNGLYLN--------------------ESVYSSYLDFVKNSDNLFLDNIS---------FWKLFGFENINFVIDKYFTLVGKTNLYVEFICNIDYFGEWKTSSSKSTIFNVVVEPIYLDFSVLIAPDLYTSLTNYYSYYPEIIVLNP |
9 | 3lx1A | 0.14 | 0.10 | 0.72 | 0.74 | CNFpred | | -----------AKEFADLIATASNLI----------DEAAFKFTE-----EGISMRAMDP----SRVVLIDLNLPES---IFSKYEVEE----PETIGINMD-KAKDTLILRKGD----------------ENFLEITFEGTKRTFRLPLIDVEELELELPEL----------------PFTAKVVLLGEVLKEGIKDASLVSDAIKFIAKE--------NEFTMKAEGNEVEIRLTLE-DEGLLDLEVEE-ETKSAYGIRLSDMVKGIGKADEVILRFGNEM |
10 | 3vthA | 0.06 | 0.05 | 0.73 | 0.67 | DEthreader | | GIVQ-VSSGLYPP-SIVG-----------VCLLKDPKDRYINGPSIIED--KTSM---KC-REYRRAQP---IGG---KRGKPFAVMMDVERLSQRPIVLLIA--LDTLGVMLPYAPIHYLLMEEIDFPIVMTSGDDSRAQPILAAVQHHYGNVYKVSSMGRFFDVAQAAMELESLMAEEKSYISAKFHNTVVNFTYDLANIIKVV-LSGGFQNRLR---NSKVPCND--------------------GGI------S-L----AVIAN-------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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