Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| Seq | ISRSIQLLAQIFEYQVFELQVEEKDGNQTGYVPYMMNDAIECYLSFHGLRISGKYDKDYEGEMWAQLEEREGRYGLIVHQGEESVFTMWFDEIMEHTNCYRYHEIGHFWRDGAEQWRQLVYMIGTIREKYRFLGEEVCNDQEMEIMSLIEFAPFYYYFPINEDPEEWYDKTEEGLECMRNLAMQAGDKDYLKWIDKYEKHPTKRMEMTLAKKLQDPKRQDLYELICEKVCNASDPYPARNYGERIDQKIQRYREQVDKKLKEQGFTGTYPQYESEHLSVCVTEEHPFTILESEDFKFKIQ |
1 | 3b35A | 0.05 | 0.03 | 0.69 | 0.61 | DisCoVER | | ----------MPPITQ-TVTWLP--------QVDAITILESTNRFYTGAQASDWIA-SLPNASVKQVSHSGYNQKSVVMTIT-IGGHLDSTITNEQSVAPGADDDASGI--------A--A--VT--EVIRVLS----------NFQPKRSISQAALQLDA--TNYKGSA----Q--DVVFITDYTDSNFTQYLT-TYGFDYACSDHASW--HNAGYP-AA--MP--FESKFNPRIHTT-Q-------D--TLANS--DP--------T----------GSHAKKFTQLGLAYAIEMGS- |
2 | 1t3tA2 | 0.06 | 0.05 | 0.75 | 0.67 | DEthreader | | HCRNETH-GAATGSGEIDEGAT-----GRGAKPKAGLNNGRPGNIHKGILIVLGGPA--QRDNVGGNAEVSDGG---ILSDESQERYVLAVAFLC-ER-GDRTVGMVARVPWQVPVA-DCAVAMSIGKLSAIPVGKDSMMSPLSLVI-SA---------VRHTL----IDLG--ALGATALAQVYR--DGGLLVALEELGGVIQL-QAF-RT-LRVWWAETTWQ-Q----------GVNSVEMAADACGGGVNGC--FVRNHSDRFE---HGE---------R-VA-------------- |
3 | 1vt4I | 0.06 | 0.06 | 1.00 | 0.74 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 5nz7A | 0.07 | 0.06 | 0.88 | 0.70 | EigenThreader | | GAVHAIFEDVTYTNVIMQALYNDKGEFIGITPDYYPEEFKQDTRFVTM--IVRNGD------EKSFSFCTGPGLGAPFTVEPGKTVIIDTFTGLSSS----------KDNENYSDAVMLRELDNLLRYFQMSELSKEVTDRIQKHAWKENFFAKGDKLSADPNIDGVYFATDEQIAIMVDVIKKHLSMMAVAALIKAAKKVKDNELAKEMARIAYFMIDLVLPYKNLEFQVAGNPRICPLLSGTATWLNLNLISLA-------------------GIEYTRSFNPILRTLKAPKCSYKFS |
5 | 6w2rA | 0.15 | 0.05 | 0.35 | 0.30 | HHpred | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------RGNKDAIDEAAEVVVRIAEESNNSDALEVLLKSEKTEDAKKAVKLVQEAKRTGTPDVIKLAIKLAKLAARAVIKRPKSEEVNEALKKIVKAIQEAVESLR------EAEESG------------------------ |
6 | 4uvkA | 0.13 | 0.06 | 0.46 | 0.42 | MRFsearch | | -----------------------------------------------------------------------------------------------------------------KRIHILFQAAEFLYPYF--------GSLIKDICKVLTFEFTHESLLLPTDSNNIILYVTTLHGLAYGGTHMRGAEAVLPHLDQLIKRLPIESSNVLASILGEKDIRKILEKIIKAFNES-----FNELDELWLNHISQLKIHLGKFLEEK------------------------------------- |
7 | 5cwpA1 | 0.15 | 0.05 | 0.35 | 0.69 | FFAS-3D | | ------------------------------------------------------------------------------------------------------------------------------------------SSDEEEARELIE-------------------RAKEAAERAQEAAERTGDPRVRELARELKR-LAQEAAEEVKRDPSSSDVNEALKLIVEAIEEAAERTGDPEVRELARELVRLAVEAAEEVQRN-------------------------------------- |
8 | 5k7vA | 0.11 | 0.09 | 0.83 | 0.64 | SPARKS-K | | -------------------------------------------------IEEVVAEMIDILAESSKKSIEELARAADNKTTEKAVAEAIEEIARLATAAIQLIEALAKNLASEEFMARAISAIAELAKKAIEAIYRLADNTDTFMARAIAATAILAIAALASNHT-TEEFMARAISAIAELAKKAIDKFMAAAIEAIALLLAILAIALLAEFMAKSAIAELAKKAIEAIYRLADNHTSPTYIEKAIEAIEKIARKAIKAIEMLAKNITTEEYKEKAKSAIDEIREKAKEAIKRLEDNRT- |
9 | 1riqA | 0.12 | 0.09 | 0.76 | 0.60 | CNFpred | | KKEAIEYAWEFVTEV-LKLP------KEKLYVSVYKDDAYRIWNEHIGIPRIWRLGE-GPCGPSSEIYVDRERYLEIWN----LVFMQYNRLTPLPHPNIDTGM-------GLERIASSNFEIDIIFPLIQFGEEVS-FETDVALRVIADHLRAITFAISD----GVIPSNEGRGYVIRRILRR-----AMRFGYKLGIPFLYKGVDLVVDIMKYPELELSREFVKGIVKGEEKR-----FIKTLKAGMEYIQEVIQKALEE-------------------------------------- |
10 | 5h3zA | 0.06 | 0.04 | 0.73 | 0.67 | DEthreader | | APIFLPGGDNF-------------------INAFQGN----STN-N--L-YLRI--A-YP-NSKSTIKSGTSTLIFEGTA--DISYTVTFRWFQDIGVELY---LK-LSFFKSHVHGHIL-SSTNANCQF----V--VGNTTYNKLLSGQSFIVLKV-----DFIVTHNILQFRVQGFDT--N----------IP--FLD----QY-DY-KEQLERIYYLAHDLIHFASPHGAAWFHQDTLRAEQAANVILRYAKNFDKLR--TG------DI-----NVKGGWRLYSGPGIYIRADIRH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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