Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | RNISFIVCMLVVCSLNIKNVMAQSRSYEGNIAVKPVQLEQKGNFLHIDIDFSLNNVKVKSARGVDLIPQLVSPERTLNLPKVSIKGRDEYLAYERELAVMSAKEKKTYEKP |
1 | 6mitC | 0.04 | 0.04 | 0.85 | 0.67 | DisCoVER | | SDDGIS-WF-TQ------PVMTTFDKVPTWSIKSDRAKLTNDRMLYLYGVEVNALTASQLRKITTDNAQINLVTQDVTSQDLVTLYGTTFNSS--------GLRMRGNLR- |
2 | 6mw4A | 0.06 | 0.05 | 0.90 | 0.83 | DEthreader | | SE--PM--SSLIEITGLVSGILAITTESDLIVVKLKSYTTYYAGRINYFAIYVTNIARTFNILVVVSGGNQTDIGSGTGSSTL----RLSLFTQVLKTYLIL-GAILNL-- |
3 | 6mitC | 0.04 | 0.04 | 1.00 | 0.54 | CEthreader | | ALNYRLIAQHVEYFSDDGISWMTTFDKDKVPTWSIKSDRAKLTNLYGHVEVNALTADSQLRKITTDNAQINLVTQDVTSQDLVTLYGTTFNSSGLRMRGNLRSKNAELIEK |
4 | 6ppsA | 0.06 | 0.05 | 0.91 | 0.60 | EigenThreader | | DPFRAAVEFTAFLKLTGRFLQGHGTDSGEAFWNRLHISPVHNANHFVSSQDVTLELSVANIGFWTREF----------YSGKMTCSAECRRIYDTILDLVVLEDRMTVVQK |
5 | 5wecA | 0.08 | 0.05 | 0.65 | 0.23 | HHpred | | ---------------AL-PDNAVSLADAPATVIAKQNFITNGMQVPLEFNLAYDSRKIKASHRYSVSARIEVDGKLRFIDGVITDPEA----------------------- |
6 | 3b7kA | 0.10 | 0.09 | 0.90 | 0.62 | MRFsearch | | ---GQLLKWIDTTACLAAEKHAGVSCVTQVITIKAKVTRAFSTSMEISIKVMVQDMGIEKLVSVAFSTFVAKPVGKIHLKPVTLLTEQDHVEHRRKVRLQHED-------- |
7 | 4ienA | 0.09 | 0.09 | 0.96 | 0.61 | FFAS-3D | | ----ELLLLLDQVAYSCASRYSEPIHIGDLVTFYAAVNYTGRTSMEIGIRVEAQNIRTGEIRHTNFTMVAVKDGKPVPVPPLEILTDRQRCRYEKAKKRRDISLQASEDMS |
8 | 4ncpA | 0.08 | 0.08 | 0.98 | 0.78 | SPARKS-K | | MFGGTLMANIDEIAAITAMKHAKPIKTGDILQYVAMVSYAGTSSMEVVVQIRIDDVFNNKHALSYLTFVALDDEGPKHVPGVYFYDTAPQRVERRKARRIESKQTIEYL-- |
9 | 3m2tA | 0.07 | 0.05 | 0.76 | 0.71 | CNFpred | | STLRSFLLAQAIHTIDLAITFGD-----GELRRVQSSVQRHDDALIVRADMAFSS-----GATASLLAGTSF---PYFEFDMKLVSSSSTLVELDNL-------------- |
10 | 1afvH | 0.04 | 0.04 | 0.86 | 0.83 | DEthreader | | QVQASYTFTWIIHPNSGNTN--YNEKFKGKATLTVDTSS-------STAYVDLSS-LTSEDSAVYYCARWRGSPYYDYWGQGTTLTVS-FPE-PV--TV-TWNSGSLSSG- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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