>PF12982 (318 residues) RAYNYPKLTGEVNIGDEVVLNTTAVELSLGTGGYHFVISNLNNMESNFTPGGHIMKLRYT PLQVKVDAVEEQESPYHDAIEEFESLENMPVVVGTLHSMLTPFVASYKRNNPSKKLVYIM TDGASLPIYLSKNVDTLKNKKLIDSTITIGNAFGGDYECINIYTALITAKEILKADVVFV SMGPGIAGTGTKYGFTGIEQGPILDAVKKLKGMPVAIPRVSFADQRDRHMGISHHSLTVL NDIVNVEVNIPITTYEDEKLDVVKRQIETKELDKKHHIVYINNKNTEEDLNYFGLSVRSM GRNYQQDKEFFDAASSAA |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | RAYNYPKLTGEVNIGDEVVLNTTAVELSLGTGGYHFVISNLNNMESNFTPGGHIMKLRYTPLQVKVDAVEEQESPYHDAIEEFESLENMPVVVGTLHSMLTPFVASYKRNNPSKKLVYIMTDGASLPIYLSKNVDTLKNKKLIDSTITIGNAFGGDYECINIYTALITAKEILKADVVFVSMGPGIAGTGTKYGFTGIEQGPILDAVKKLKGMPVAIPRVSFADQRDRHMGISHHSLTVLNDIVNVEVNIPITTYEDEKLDVVKRQIETKELDKKHHIVYINNKNTEEDLNYFGLSVRSMGRNYQQDKEFFDAASSAA | |||||||||||||||||||
1 | 3giqA1 | 0.07 | 0.05 | 0.79 | 0.65 | DisCoVER | -KLDF--KI---------TGGWIID---GTGPRRRADLGVRDGRIAAI---GELGAHPARHAWDASG-------------------------KIVAPGFIDVHGHDDLMKQGITTVVVGNCGVSAPAPLTAAALALL--GMINVAALVGHANLRLAAMRQQMQDMLQAALEAG-A--VGFSTGLAYQPGAV---AQAAELEGLARVAAERRRLHTSHIRNEA-----DGVEAVEEVLAIGR-GTGCATVVSHHKCNWGRSRATLANIDRARV--EVALDIYIFCCMVGSDGLPNDSFLEVAR----M--TALPARVF- | |||||||||||||
2 | 4xc6A1 | 0.06 | 0.04 | 0.73 | 0.83 | DEthreader | IRILVGIAQVFARDRMGLAG---------------ITDMAQRCDIDLT-----------------TALENGKADLVSALHAQAKAAAVPVLGITGKSSLTDELIRRFRLDQDALSIAVISIDPSALLG-DRIRM-NAIN-HPNIFMRSLATR------SQALPDVIAACKA-ARFDLVIVETSGIG--------QGDAAIVPHV--D------L-SLYVMTP-E-FGAASQLEK--IDMLD--F---ADFVAINFAQDAWRDVAKQVQR-NREQWSDMPVYGTQASRFND-----------------DGVTMLYQGLV | |||||||||||||
3 | 4n0qA2 | 0.12 | 0.05 | 0.44 | 0.54 | CEthreader | ----------------------------------------------------------------------------------------------RDGQQAEVMADYVLKNMKDKKVAVIHDKGAYGKGLADAFKAAINKGGITEVHYDSVTPGDKD------FSALVTKLKSAGAEVVYFGGY-------------HAEGGLLSRQLHDMQALVLGGEGLS-----------NTEYWAIGGTNAQGTLFTNFDIFKWDDGKIVGL----------------------------------------------------- | |||||||||||||
4 | 6cy1A | 0.09 | 0.07 | 0.74 | 0.65 | EigenThreader | SQSFFDKVSRAVVGKSKV----DLDDLEEVLIAS-----------------------DVGVETTVKIIRRIEERVARDEISGLLLGTKPYVIMVVGVGKTTTIGAHQFKSEGLKVLGAA----DTFRAAAVDQLVIWSERVGVPIVK-----QAMGS----DAFDTVQSAVSQDADVVIIDTAGRLH----NKVNLMNELSKIKRVMQKAPHEVLLVLDGSTG-------QNAFEQAKQFTAAT-EVTALAVKLDGTARGGVVIGISDQFQVP---VKYIGVGEKM-----------------------------QDL | |||||||||||||
5 | 2gq8A | 0.14 | 0.12 | 0.82 | 0.36 | HHpred | ---MTQSLFQPITLGALTLKNRIVMTRSRASGDAGLIVSEGTQI--S--PT-----AKGYAWTPGIYT-PEQIAGWRIVTEAVH-AKGCAI-FAQLHVDNI---DGQQPISSSTVKVFAMTKADQVIADYRQAALNAMEAGFDGIELHAANEYGGSLELDEVVAALVD---AIGAERVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIA---EVD---WDDA---------------------PDTPVSFK----RALREA---YQGVLIYAGAEKAEQAINDGLADMIGFGRPFIANPDLPERLRHG- | |||||||||||||
6 | 3eegB | 0.12 | 0.08 | 0.70 | 0.37 | MRFsearch | ---------------------------------------------------IFVFDTT----------------NTEEKIIVAKALDEVDVIEAGFPPGDFNSVVEITKAVTRPTICALTRA---KEADINIAGEALRFAKRSRIHTGIG-----RENILEAVAAVKQAKKVV-HEVEFFCED---------AGRADQAFLARVEAVIEAGADVVNIPDTTG--------YLPWQYGERIKYLDNVKAILSAHCH-NDLGLATANSLAALQNGARQVECTINGTALEEVVAECHKETLGLETGINHKKLVPISHLVST | |||||||||||||
7 | 3nvaA1 | 0.14 | 0.10 | 0.68 | 0.48 | FFAS-3D | ------------------------------------------------------------------------------------------IVVTSVGKGTLVASIGMLLKRRGYNVTFVTEDGAETDLDLGHYERFMDVNMTKYNNITAGKVYGQTVQIIQIKDMIRYASKINNAEITLVEIG-GTVGD-----IESLPFLEAVRQLKEEGEDNVIFVHIATGELKTK---PLQHSVQELRRIGIQPDFIVGRATLPLDDETRRKIALFTNVKVDHIVSSYDVETSYEVLESQKLKLEDRQVDLTDWISFVNNI---- | |||||||||||||
8 | 2yv2A | 0.16 | 0.13 | 0.79 | 0.60 | SPARKS-K | ------LVDSETR---VLVQGITMLEYGTK------VVAGVTPGKGGSEVHG-------------VPVYDS----VKEALAEHPEIN--TSIVFVPAPFAPDAVYEAVDA--GIRLVVVITEGIP-VHDTMRFVNYARQKGA---TIIGPNCPG--AITPGQAKVGIMPGHIFKEGVAVVSR-------------SGTLTYEISYMLTRQGIGQSTVIGIGGD------PIVGLSFTEALKLFQEDEALVLIGEIGGDMEERAAEMIKKGEFTKPVIAYIATYEGKVKALREAGVEVAE---TPFEVPELVRKAL--- | |||||||||||||
9 | 1qnlA | 0.13 | 0.08 | 0.67 | 0.95 | CNFpred | --------------GVRFLVGCYMSHTRKA-ADALLCYPNPY-----------EGFEYSP----------------------------NIVYGGPAPNQNSAPLAAYLIRHYGERVVFIGSD-YIYPRESNHVMRHLYRQHGGTVLEEIYIPLYPSD--DDLQRAVERIYQA-RADVVFSTVVG-------------TGTAELYRAIARRYRPPIASLTTS------------EAEVAKMESDVAEGQVVVAPYFS-PASRAFVQACHGFFPE-------NATITAWAEAAY-------------WQTLLLGRAAQAA | |||||||||||||
10 | 4xc6A1 | 0.08 | 0.06 | 0.75 | 0.83 | DEthreader | IRILVGIAVFGYSEDGMGLAG--------------MITDMA-QRCDIDLTRYA------------TALEGKADPELVSALHAQAKAAAVPVLGITKSSLTDELIRRFRLDQDALSIAVISIDPSALLG-DRIRM-NAINHP-NIFMRSLATR-----ISQALPDVIAACKA-ARFDLVIVETSG-IG----QG---DAAIV---PHV-----DL-SLYVMTP-E-FGA-ASQLEK-IDMLD--F---ADFVAI-FAQDAWRDVAKQVQRNREQW---ADMPVYG-TQ---------AS----RFN-DDGVTMLYQGLV | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |